Detailed information on CNT30517589


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SFF9|GL17_ARATH, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071407Juglans regiaQuercus suber35.0379.1585.48186forward
CNT30467930Juglans regiaSaccharum spontaneum12.2431.186.1565forward
CNT30717911Juglans regiaMalus domestica golden38.4225.0683.82204forward
CNT3031606Juglans regiaTheobroma cacao35.9741.9884.82191forward

Expression of CNT30517589

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MRANDMPRVLRPGNSFTVTAVTFDPCRPEVSPATFNPGRKKSSALTSFGSLQNF

>peptide 2 (37 aa)
MGGSDPKTASAMVITPGFWLLRPAKAMALDFPILSWK*

>peptide 3 (76 aa)
FSEQFLKIFNQILVYLEGLGENIRIDGRLRSEDCISYGDNPRILAAETGKGNGIGFSDIELEVNETNWEYKDISSI*

Sequence

>CNT30517589
ATTTTCAGAACAGTTTCTGAAGATATTCAACCAGATTCTTGTCTACTTGGAAGGCCTTGGTGAGAACATCAGGATTGATGGGAGGCTCAGATCCGAAGAC
TGCATCAGCTATGGTGATAACCCCCGGATTCTGGCTGCTGAGACCGGCAAAGGCAATGGCATTGGATTTTCCGATATTGAGCTGGAAGTGAACGAGACCA
ACTGGGAATACAAAGACATCTCCAGCATTTAGAACTTTGGTGAAGAGACGGTTTCCATCTCCGTTAGAGGTGACAAAGCCAACGTACAAAGTACCCTCCA
AGACAAATAGAACTTCAGTGCCACGAGGATGTGTGTGTGGAGGATTCTGGCCGTATGGTGCAAAGTCAATGCGAGCCAATGATATGCCTAGGGTGTTGAG
GCCTGGTAATTCATTCACAGTAACGGCGGTGACATTCGACCCCTGTCGACCTGAGGTGTCTCCGGCAACATTTAACCCCGGGCGGAAGAAGTCTTCAGCT
TTGACATCCTTTGGATCCTTGCAAAACTTTC