Detailed information on CNT30517135


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695491Juglans regiaOryza sativa25.8413.2680.14146forward
CNT3085891Juglans regiaVigna radiata30.2729.5384.8171forward
CNT3082871Juglans regiaBrassica juncea34.5123.6980.51195forward
CNT30218862Juglans regiaKalanchoe fedtschenkoi29.0337.0282.93164forward
CNT30572550Juglans regiaVitis vinifera49.0345.4885.56277forward
CNT30102918Juglans regiaOryza rufipogon25.849.7480.14146forward
CNT3051003Juglans regiaCucumis sativus19.4741.6783.64110forward

Expression of CNT30517135

Peptides detected in this lncRNA

>peptide 1 (30 aa)
CVRPYSFNTNTGTLHRYLIKKCYINKDPSL*

>peptide 2 (39 aa)
MIKHHSEFQKPTFIHLVEMRKEQTHFRPSGNNLLLPKHK*

>peptide 3 (56 aa)
MVMFSTRAHFPTVECHPIILPEMQACFLMRTPRITVQRESLTPDSTTQPGPIATSGP

>peptide 4 (62 aa)
MYIFPKNGHVLYSGPFPNSGVPSNYTAGNASMLLDADSPHHCAARESNSRLNNTTRANCNIRS

Sequence

>CNT30517135
TGTGTACGACCATATTCATTCAATACAAACACTGGGACATTACACCGATACCTGATTAAAAAATGTTACATAAATAAAGATCCATCTTTATAAGTTACAC
AAGGTTGGACCAACAAATAATTTATTCCTACATTTACACCAATGATTAAACATCACTCCGAATTCCAGAAACCGACTTTTATACACCTTGTAGAGATGAG
AAAAGAACAAACACATTTCAGACCCAGTGGCAATAACTTATTACTTCCCAAACACAAATAAACTAATTTCACCAACATCCCCTCCTCACATAACGATCTC
TGGCTTCAAAATACTTGCTTTGATCTCTTTGTGGGGCAAAACCACACCACCATTACTGTAAATTTCATCACAGACATGTACATCTTCCCCAAGAATGGTC
ATGTTCTCTACTCGGGCCCATTTCCCAACAGTGGAGTGCCATCCAATTATACTGCCGGAAATGCAAGCATGCTTCTTGATGCGGACTCCCCGCATCACTG
TGCAGCGAGAGAGTCTAACTCCAGACTCAACAACACAACCAGGGCCAATTGCAACATCAGGTCCA