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Detailed information on CNT3051634


BLAST search results

BLAST vs Swiss-Prot:
sp|P05993|PAPA5_CARPA, E-value = 9e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691218Amborella trichopodaOryza sativa17.4726.2181.54195forward
CNT30519738Amborella trichopodaSetaria italica18.9137.4880.09211forward
CNT3070873Amborella trichopodaQuercus suber13.8921.6580155forward
CNT30599767Amborella trichopodaFraxinus excelsior9.5925.9182.24107forward
CNT30218447Amborella trichopodaKalanchoe fedtschenkoi5.6520.5990.4863forward

Expression of CNT3051634

Peptides detected in this lncRNA

>peptide 1 (36 aa)
REYGHKQAEATEHKARDGHKQVTEQNISNQSHNHFK*

Sequence

>CNT3051634
GCCGAGAATATGGGCATAAGCAAGCAGAAGCAACAGAACATAAAGCTCGCGATGGACATAAGCAAGTAACAGAACAGAACATATCAAACCAAAGCCACAA
CCATTTTAAGTAAATACCCATTTCAAGTTTTACAACTACACGGTTTGCTTCAGCTGGTCACCGCTTTAATAGGACTGAGTTCTACAGAGCAATAGAGCTT
ATAAACATCACCCAGCAGAGTTGATGCCACAAGCTAGAATGTGTCTTTTAACAACAATATATATCTAAAAGCTTCTAAACTTATGAGGCCAGTACCATTC
ATGTATTTACAAAGATAAAAAGTTCCACATATTAGGCCAAGAAGGTGCAAGAGAATCACGATTGGATAGAAGCCACAGTCGAAACCATGGAGTCTACACC
ACAAATATTGTGACCCCTGCAAATCTTGTAATACCCTTTCTCACCCCATGTCTCACCCCAGGAGTTCTTGATGATCCAGTAGGCCTTGTCCTTGAGCCTG
ATAGGTGCATACCCAGCTGAGCCATAGCCTACTATCAGAACCCCGTGGTCCAGATTCCTCTTGCTACAAATGTATGGGCACGAAACCCCACCTATGTATG
TTTGCATGAAGACTGCATTGATACCCACTGCATAAAAAGAAGGCATGAATTCAAGTGTGAGAGGAGCATGAATTCAAGTTCTGAGATCAACACTCAGAAT
GATGTGCTAGACGTTTAATTTCTTGTTGTCAGCTATCTGAGAATGTATGTTGGGAATGTATAATTTTTTATGTATGGAATGTTGGACTAGAAAGAACAGC
GAGATTTGGTTTTTTTTGTTTTTTGGGTAAAATAGTGAGATTTATTTTTAAAATAAAATAAATTATTAACAAAGGGATGTTGTTTTAGAATGAAAAGAGA
AAATGTATTTAATATAACCTAACTAAACTTGCCAGCATGGAATGTCAGGTTAGAAGGGAAAGGCAAGAAGTATTCCTATAGATTGTATTACAACTCAGAA
TATAAAATAAAACCCTATACATAGAGATTGGAAACAGAAAAATCCTATTCATTCATTTAGCTGCAATTGCTCTGTGTATGTGTGGCATGTGTGGGGGTCC
CCGGGGGATTGGGGGG