Detailed information on CNT30513302


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534827Juglans regiaEucalyptus grandis7.0834.4185.94128forward

Expression of CNT30513302

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVSWRPLTKQLTCFPVGRRPTLEMRVSKWV*

>peptide 2 (40 aa)
PQSTLSFLRIPPHQYIERDIWNNRTRSTKCQYHAAASKPT*

>peptide 3 (47 aa)
METTNKATDLFSSREEANFGDEGLKVGMIITTEVVCCSLVSSPKGSK*

>peptide 4 (58 aa)
MSVPCSCFKANVMLWYGPSGLRGLWTYGEDNTRKNEMYFWLIQGSQASQENYEMKYFL*

>peptide 5 (44 aa)
MLEKRKVWAHGWEEFGGLDYELRKHRLSQWLPKGNEVERLGRRL*

>peptide 6 (46 aa)
MENLGEGSDGMNCRGNDLHGNWVGVGMIQLVLLVVNFGCVRAVKFQ*

>peptide 7 (95 aa)
MKSDDGYKIFGWSLMVVEKLLGETNPTSGIIAPLKHGKSRRRERWNELSWERSSWELGGRWDDSACSVGCQFWMCKSCEISVSLSSISSWLVSNC*

Sequence

>CNT30513302
CCTCAATCCACTCTTTCGTTCCTTCGTATACCTCCCCACCAATATATAGAGAGAGACATATGGAATAACCGAACCAGATCTACAAAATGTCAGTACCATG
CAGCTGCTTCAAAGCCAACGTGATGCTCTGGTATGGACCCAGCGGTTTGAGAGGCCTTTGGACCTATGGTGAGGACAACACGAGGAAAAATGAAATGTAT
TTTTGGCTGATTCAAGGTAGCCAAGCCTCCCAAGAGAATTACGAAATGAAATACTTTTTATAGGAAACCTTCTTACAATGGAAAATTAAATTACTATAAC
TTTGAAAGGGAAATTTGCATGATTCTTGGCATCCCTTATTTTTAGTCATCCTTGATTCCCTCCTATTGATTTTATTTCCATTTTGGGTCTTTATCACTCC
TTCCCCCCTTACACAAGGCTTTTGTCTTCAAGAGCTACATTAGGAAATTGTTGCTGCAGATTTTCCAAGTCTTCCCATGTGGAATTTGATGGTGTCAAAC
CTTGCCAAAGAATGAGGACCTCATTGCGGTGGTGTTTTCGCGTTCAGCGGTCAAGAATAGCATAAGGTATTGCCTGTAAGCTCTTCGGTCATAACGACAT
CTCCATCTTCATCGGCCTGATAAGCTTCATCATGAAAAGTCTCTTGCATCGGTGCCCAAGTACGTACTTGTCATTACATTTGAAGCATAAACCACGAGAT
TGACATTCCCGTAATTCATCGAGAGTGAGTCGTTTGCTGGGTAGTCAGTTGGTGGATTGGAAGGATGGGTAAGGAGTGCGAGTGTTGTTGTTGTTGGTGG
CTTGAGAAGAATATGTTGTAAAGGGTCGAGGAAGGTTTTGGGTGTGTTGTTGTAGGGGAATTGTGGATTGTGCAGACCGGGTGTTTGATGAAATGCTTGA
GAAGAGGAAAGTTTGGGCTCACGGCTGGGAGGAATTTGGAGGGCTTGATTATGAGCTTCGTAAACACCGGCTAAGCCAATGGCTACCGAAAGGGAATGAG
GTTGAGCGGCTAGGACGCCGGCTTTGATGGTGTCATGGAGACCACTAACAAAGCAACTGACCTGTTTTCCAGTAGGGAGGAGGCCAACTTTGGAGATGAG
GGTCTCAAAGTGGGTATGATAATCACGACAGAGGTAGTTTGTTGTAGTTTGGTGAGTTCGCCAAAGGGATCGAAGTAATGACTGGGATCATACCGTGCAT
GTAGGCCTTCAATGAGTTATTGCCATGAAATAATGCGGTCTTCTGGACTAAGCACTTGGTACCATAGCTGGGCGTTGTCCTCTAAATGAAAAGCGACGAT
GGGTACAAGATCTTCGGGTGGAGTTTAATGGTAGTGGAAAAATTGCTCGGCGAGACCAATCCAACTAGTGGGATCATTGCACCATTAAAACATGGAAAAT
CTAGGCGAAGGGAGCGATGGAATGAATTGTCGTGGGAACGATCTTCATGGGAATTGGGTGGGCGTTGGGATGATTCAGCTTGTTCTGTTGGTTGTCAATT
TTGGATGTGTAAGAGCTGTGAAATTTCAGTGAGTCTTTCCAGCATTTCTTCTTGGTTGGTTTCCAATTGTTGAACGCGATCCTCCATGCCGAGGCTTTGG
TACCACTTTGGTATGGACCCAATGGTTTGAGAGGCCTTTGGATCTATGGTGAGGACAACAAAAGAAGAAAAAGGAAATGTATTTTTAGCTGATTGGAGGT
AGTCAAGCCTCCCAAGAGAATTATAAAATGAAATACTTTTTATTGCTTGTCATTTTCGAAATCATTTGGTTTTTTTTTAGGAAACCTTATAATGAAAAAT
TGAAGTTCT