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Detailed information on CNT30513083


BLAST search results

BLAST vs Swiss-Prot:
sp|P27774|KPPR_MESCR, E-value = 2e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691096Juglans regiaOryza sativa57.8626.484.25254forward
CNT30670674Juglans regiaSetaria viridis43.5126.984.82191forward
CNT30373358Juglans regiaArabidopsis thaliana56.4948.9279.84248forward
CNT30628885Juglans regiaVigna unguiculata65.1568.4284.97286forward
CNT30708150Juglans regiaGlycine max63.151.1188.09277forward
CNT30565281Juglans regiaActinidia chinensis57.8654.2785.04254forward
CNT3087966Juglans regiaVigna radiata65.1552.3886.36286forward
CNT30552726Juglans regiaOryza glaberrima57.8651.1184.65254forward
CNT30145996Juglans regiaMedicago truncatula59.6864.0681.3262forward
CNT30608349Juglans regiaGossypium raimondii26.6523.1286.32117forward
CNT30686133Juglans regiaTriticum urartu21.8738.489.5896forward
CNT30364562Juglans regiaSorghum bicolor32.5715.1684.62143forward
CNT30595648Juglans regiaOryza meridionalis57.8641.9884.65254forward
CNT30369615Juglans regiaOryza glumipatula42.1433.4584.86185forward
CNT30644238Juglans regiaCannabis sativa39.8665.7983.43175forward
CNT30575421Juglans regiaOryza barthii57.8635.3884.65254forward
CNT30116076Juglans regiaOryza nivara57.8635.3884.65254forward
CNT30114771Juglans regiaEutrema salsugineum38.2743.9882.74168forward

Expression of CNT30513083

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MLEVYLHGVQTFNDQDLGRLVNSSPILESLNLLIHEIKVVGSRVKRSDSLLFPSSPIQ*

>peptide 2 (53 aa)
MGCKPSMTRILGGLSTAVPSLRALTCSYMRSKSLALGSSAVTPFSFLPVLSSE*

>peptide 3 (43 aa)
MRVLESGLPPLGGSAAPPNTLVSLLMKVLFPHPESAARPITIVC

Sequence

>CNT30513083
GTACAGTAAATAATTTATCCGAATGAGATATACAACAAATAGAAAGAATTTTGCTAGAGAGAGAGAGAGAGAGAGAGACTGAGAGATTAATGCTTGAGGT
TTACTTACATGGGGTGCAAACCTTCAATGACCAGGATCTTGGGAGGCTTGTCAACAGCAGTCCCATCCTTGAGAGCCTTAACCTGCTCATACATGAGATC
AAAGTCGTTGGCTCTCGGGTCAAGCGCAGTGACTCCCTTCTCTTTCCTTCCAGTCCTATCCAGTGAGTGATAGTCATCCAAGCATATCACAGTGGTGGTG
TCACTGATGAGAGTGTTGGAATCAGGGTTGCCGCCCTTGGGTGGCTCTGCAGCACCTCCAAACACGTTGGTTAGTCTCCTCATGAAGGTGCTCTTCCCGC
ACCCGGAGTCTGCTGCCAGACCAATCACAATTGTCTGTG