Detailed information on CNT3051156


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518818Cucumis sativusJuglans regia36.4630.9893.07101forward
CNT30381537Cucumis sativusManihot esculenta31.7728.7690.9188forward
CNT30566542Cucumis sativusActinidia chinensis34.334.890.5395forward
CNT30445180Cucumis sativusSaccharum spontaneum19.1323.8796.2353reverse complement
CNT30604390Cucumis sativusOryza punctata19.1321.5496.2353forward
CNT3039703Cucumis sativusMarchantia polymorpha20.945.0289.6658forward

Expression of CNT3051156

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTMLMHLKKRSSLSLLVSTNLKMLATLALQP*

Sequence

>CNT3051156
TTGGGTAGAAGATAAAGCTAGTTGTTCCATTATAAACTGATACATTAAACAAAATTCAACAAGTAAAAATGTTCCCAAATATCAGAAACACCAAAACAAA
AAAGCAAAGGGCAGAAACAAGCCCACAATTCTGACTCCCTAAACAGCAATATATAGTGAATGACAATGTTAATGCATCTAAAAAAGAGAAGTTCCCTTTC
CCTTCTTGTCTCCACCAATCTCAAAATGCTTGCAACCCTGGCATTGCAACCTTAGCACAATCTTCTTTGTAGTTTTA