Detailed information on CNT3051057


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674332Cucumis sativusSetaria viridis24.4515.9587.556forward
CNT30191206Cucumis sativusSecale cereale24.454.5889.2956forward
CNT30442766Cucumis sativusAegilops tauschii24.4510.9689.2956forward
CNT30309793Cucumis sativusCamelina sativa27.077.9788.7162forward
CNT30612508Cucumis sativusArabis alpina28.382.5687.6965forward
CNT30605685Cucumis sativusGossypium raimondii25.767.7289.8359forward

Expression of CNT3051057

Peptides detected in this lncRNA

>peptide 1 (44 aa)
FFFFFWFLKIIAIKILKHNNNLFKKQKTSHRKLEPQTCGFKGDS*

Sequence

>CNT3051057
TTTTTTTTCTTTTTTTGGTTCTTAAAAATAATTGCAATTAAAATACTCAAACATAACAACAATCTTTTCAAAAAACAAAAAACTTCCCATAGGAAATTAG
AACCTCAAACCTGCGGATTTAAGGGCGATTCTTAAATATATTAACCAACAATGCGAGCTCAATCTACAGCTTGTCCTCGAAATCGGAAAGTGGGGTCATT
TGCTCCTTCAACCCCTTCCTCTTCCTGAT