« Back to Solanum lycopersicum search


Detailed information on CNT30508636


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3C1K7|RR18_NICSY, E-value = 8e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192974Solanum lycopersicumSecale cereale36.7454.1290.73151forward
CNT3077213Solanum lycopersicumBrassica juncea62.2932.2888.67256forward
CNT30475732Solanum lycopersicumSaccharum spontaneum18.4924.693.4276forward

Expression of CNT30508636

Sequence

>CNT30508636
AATCTAGATTCTTGTAATTATGATTCAAGTGAAGAAAAAGTAAGCCTATTTATTTCGGGCTTTAAAACAAGTAGTTCTAGCGGTTGACTCGGTTGTCTCA
AATTGTTTCTCATTATTGAGAAAAGGTAACAAAGATAAAGTACGAGCTTGTTTTATAGCAAGAGTAATTAATCATTGTTGTCTCAAGGTCAATCTATTCA
CGTGTCTTGATAATATTTTTCCTTGTTCACTAATAAATTGAATAATTAAACTCATGTTTCTATAATCAATTCGATCCCCCGATCAAATCGAGGGCAAACG
CCTGCTAAAAGATCGCTTGGATTTATCCATGGTTTGTTTGTTTATTTAATTTATTCCTTATCCCTAAAATTCTATTTCTTAATTCGATTTCATTTTAAAT
CCACTCAAAAT