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Detailed information on CNT3049670


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42679|DCAM_CATRO, E-value = 3e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512045Cucumis sativusJuglans regia31.1233.0879.77173forward
CNT30195916Cucumis sativusPisum sativum32.9116.6179.78183forward

Expression of CNT3049670

Peptides detected in this lncRNA

>peptide 1 (83 aa)
QGINGVIALIPHTGTGSVNMPFPRFIRTSHHVSRTIEAKPGQIAIENSNFLREAAMGKRLGTRKDKAAASVPHRLHSKRQRIS*

>peptide 2 (35 aa)
GYKRGYCFDSPYWHRQRKHAISSFHQDFPSRKQNH*

Sequence

>CNT3049670
CAGGGTATAAACGGGGTTATTGCTTTGATTCCCCATACTGGCACAGGCAGCGTAAACATGCCATTTCCTCGTTTCATCAGGACTTCCCATCACGTAAGCA
GAACCATTGAGGCCAAGCCTGGCCAAATAGCCATCGAGAACAGCAACTTCCTCAGAGAAGCTGCGATGGGGAAAAGACTGGGCACCAGGAAAGATAAAGC
TGCCGCGAGTGTACCTCACAGACTTCACAGTAAGAGACAGCGAATCAGCTAACTTCAGCAGAGCTGGGATTGAAAGAAGCAGCTTAGTAGTGCCGCAAGT
TTTGATGATGAACTTGTATGGGTACACGAAGAGGCTCGAAGAATGATACTTCAAGCCTCTTTTCGTAGCCTTCAAATCCAATAGCAGAGGTTGGACACGT
CATCTTTTCTTAAAAGGAAGCTAATTATGTTGAGAGATTGAACGAGAGAACGAGGATAGTAGAGAGTACTGAAGAAAAAAGACAAACTAAAAATTATTAT
GAAACTAAGGATCCTGGGGCGCAGGGAAAACGAAACTCAGCGAAACTCAGGATGGC