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Detailed information on CNT30496153


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520681Digitaria exilisSetaria italica25.1631.193.97116forward
CNT30553785Digitaria exilisOryza glaberrima16.9221.4989.7478forward

Expression of CNT30496153

Peptides detected in this lncRNA

>peptide 1 (75 aa)
PGAKMKMSINTIRIVLVSIILLTLVISLTPSPVTSPKSRRKSRDIIVRGCNNNCSVACCYCNIQRSPPVCERCCG*

>peptide 2 (70 aa)
ARSQDEDVYQHHKDSPRLHHPFNPGYFTYTFTSYKPKEQAKISGHHRTRLQQQLQCGLLLLQHSKVPTSL*

Sequence

>CNT30496153
GCCAGGAGCCAAGATGAAGATGTCTATCAACACCATAAGGATAGTCCTCGTCTCCATCATCCTTTTAACCCTGGTTATTTCACTTACACCTTCACCAGTT
ACAAGCCCAAAGAGCAGGCGAAAATCTCGGGACATCATCGTACGCGGTTGCAACAACAACTGCAGTGTGGCCTGCTGCTACTGCAACATTCAAAGGTCCC
CACCAGTTTGTGAAAGGTGCTGCGGATAATTTCAACTCCAAGAAGAACATGGATGGGCAATATGTTTTCATTTAGTTATTCTTCATAATGAAGCAGGACC
CTCCTTTGGTCTGACTATCTCGTATACGGATAACACTGGGGAAAAAAAATATTCCGTTCCTCTAGTTATTTCTTCTTGTTATCTGGAAGTAATAATAACA
GAGGCTCAGAGCTCTAAGATTCTAACCATTAAGTAAAGAATAGTTTTATGCTCATTGCAAC