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Detailed information on CNT30486698


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526301Olea europaeaPhaseolus vulgaris920.2387.85107forward

Expression of CNT30486698

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGLMERVKREIGGNSKVSGSEIRLMEKFEH*

>peptide 2 (53 aa)
MVFSCMNSMLEAICAHSLSVIPPLSLSLHTHTYIYTDTHAEYSDVLSAINLYN*

>peptide 3 (55 aa)
KPSSFLVEQLDLHMSFYIRLSKFRLPMFQLSLSLYIYIYDLYSLSGPVMYGKVLF*

>peptide 4 (59 aa)
MQNKKDEVLMTAINPPSVQLCIIQQLFYLGIFKSFCTHEFQCDLRYAHVRLPLFNENEFG

Sequence

>CNT30486698
AAAGCCCTCGTCCTTTCTAGTGGAACAGTTGGACTTGCATATGTCTTTCTATATTAGGCTTTCCAAATTTAGGCTTCCTATGTTTCAGCTCTCTCTCTCT
CTCTACATATACATATATGATTTGTATTCTCTCTCTGGTCCTGTAATGTATGGGAAAGTATTGTTTTGATGGGTAAGGGAGGTGACAGAAGAGAGTGAGC
ACACATGGTGTTTTCTTGCATGAACTCCATGCTTGAAGCTATCTGTGCTCACTCTCTATCTGTCATCCCACCACTCTCTCTCTCTCTACATACACACACA
TATATATATACAGACACACACGCAGAGTATAGTGATGTTCTTTCTGCAATTAATTTGTATAATTAAAGTCTTGTACGTATTCTAAAATGATACGTCATAG
CCCTTTGTATGCATAATTTATCTCTTCTGCGTGTTTGGAAGTCTAATCCAGCACAAGAAAGTTGAGTTACATAATTCATTTCATACGAAACAAATTAACA
ATTGTCATCGAAATTTTTGCATCTCGATTAGGTTTGATCCCACACTTTTTTGTTGCGTTTACGTGTATCATATCTAAACCTAACTTGTGTATTTAGGATG
TGGTGCTTGACAATATTATAATAATCACCATGAAAGGGATTGACATATATACTTCACAAATGGTATGAATTTGTTGGGTGTGGCTTGATAAATGTTTTAC
ACGCTTATCCCGACTCTTATATATGCAATTTTACTTAATTTATTGTAAGTCATCGTAGGTAAAAATCAGATTTGGAGGTACATGGGATTGATGGAAAGGG
TTAAGAGAGAAATTGGAGGAAATTCAAAAGTTTCGGGGAGTGAAATTCGACTTATGGAAAAGTTTGAACACTGAGGAAGAACAATCGTGGATGACTATGG
AGATTCAAGAACAAACATAGAAGCTTTTGGAAATTGCAAGATCAATGTTTGAAGATTTGGAGCGAAAATGGTCAAAATCATACGAGAAACTCAAAAGTAG
GAGCCAAAATGCAAAACAAGAAAGATGAAGTGCTGATGACCGCAATCAACCCGCCGTCCGTCCAATTGTGTATTATTCAACAGTTGTTTTATTTGGGGAT
ATTTAAATCCTTTTGTACACATGAGTTTCAATGTGATTTAAGATACGCCCATGTTCGTCTACCATTATTCAATGAAAATGAATTTGGAA