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Detailed information on CNT30483535


BLAST search results

BLAST vs Swiss-Prot:
sp|P26851|NU4LM_MARPO, E-value = 5e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378674Chara brauniiArabidopsis thaliana25.776.7580.99142forward
CNT30592658Chara brauniiMusa acuminata25.596.4480.85141forward

Expression of CNT30483535

Peptides detected in this lncRNA

>peptide 1 (55 aa)
CLYVVSYYYSEPGQEPWPSAYTEGRMKQAICQDRALPNQIRYEYTLKLAKLPRNS*

Sequence

>CNT30483535
TTGTTTGTATGTAGTGTCGTATTATTATAGTGAACCCGGGCAAGAGCCGTGGCCTTCGGCCTACACAGAGGGGCGTATGAAACAAGCGATTTGTCAAGAT
AGAGCTCTTCCTAACCAAATACGTTATGAATATACTCTCAAATTAGCCAAATTACCAAGAAATAGTTGAAATGATTTATGAATTCGTTCTAAACTTAGTC
AATGAACAAATAAGTGGTGTACCAGCAGTTAAACAACGATTTTTTCCTTTTATCTAGATAAACAGAAAAGACTAAAAAGTTCAAATTGACAGCAAGTAAC
ATTAACTCAACTGACATTAACATAATAAGGATATTCTTTCTATTTAAAAAGATTCCCCAAATACCTAAAAGAAAAAGAATCATTGAAAATGTTAAATATT
TCACTAAAGTCGCACTCTTGAATGTTCGGTCTACCTGGAGTATTGCACGCTTCGCGTGAGAACAGTCCAGAAATTCCGGATCGTATATGCTGTCCAGCAC
CACGGTGAGGGCTTTCTGTACGATAAGATAAGGCCACGCTTGTGGCTCAAA