Detailed information on CNT30445641


BLAST search results

BLAST vs Swiss-Prot:
sp|P09044|G3PB_TOBAC, E-value = 2e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526307Saccharum spontaneumPhaseolus vulgaris33.6843.5683.6798forward
CNT30628639Saccharum spontaneumVigna unguiculata31.6212.9483.792forward
CNT30361627Saccharum spontaneumSorghum bicolor54.6422.8497.48159forward

Expression of CNT30445641

Peptides detected in this lncRNA

>peptide 1 (95 aa)
LKSTDTSGTSQTDSTPFSGPSAALRNAAFTSSAVMPVFTVLITRSTTDTFGVGTRSAMPFSFPFSCGSTSATALAAPVLVGTMFSAAARALRRSRW

>peptide 2 (95 aa)
SEVHGHERHIADRQHALQRAVGGLAERRVHVVRRDARLHGVDHQVHHGHVRGRHTERDAVQLPLQLRQHQRHGLGRARARRHDVQRRRAGPPEVTV

Sequence

>CNT30445641
ATCTGAAGTCCACGGACACGAGCGGCACATCGCAGACAGACAGCACGCCCTTCAGCGGGCCGTCGGCGGCCTTGCGGAACGCCGCGTTCACGTCGTCCGC
CGTGATGCCCGTCTTCACGGTGTTGATCACCAGGTCCACCACGGACACGTTCGGGGTCGGCACACGGAGCGCGATGCCGTTCAGCTTCCCCTTCAGCTGC
GGCAGCACCAGCGCCACGGCCTTGGCCGCGCCCGTGCTCGTCGGCACGATGTTCAGCGCCGCCGCGCGGGCCCTCCGGAGGTCACGGTGGG