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Detailed information on CNT30444092


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84PD8|SAP11_ORYSJ, E-value = 2e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672179Aegilops tauschiiSetaria viridis21.6352.0890.29175forward
CNT30523258Aegilops tauschiiSetaria italica24.7217.9191200forward
CNT30533125Aegilops tauschiiEucalyptus grandis12.9820.1985.71105forward
CNT30255362Aegilops tauschiiAvena sativa30.1621.1890.98244forward
CNT30468767Aegilops tauschiiSaccharum spontaneum24.611.9288.94199forward
CNT30141231Aegilops tauschiiLolium perenne32.3925.5490.46262forward
CNT3067877Aegilops tauschiiLeersia perrieri24.3518.6489.34197forward
CNT30572839Aegilops tauschiiVitis vinifera9.6431.284.6278forward
CNT30330555Aegilops tauschiiDioscorea rotundata14.0936.8985.09114forward
CNT30102874Aegilops tauschiiOryza rufipogon24.3522.4491.37197forward
CNT30580811Aegilops tauschiiEchinochloa crusgalli21.6317.1992175forward
CNT30117496Aegilops tauschiiOryza nivara24.3521.391.37197forward

Expression of CNT30444092

Peptides detected in this lncRNA

>peptide 1 (40 aa)
PSFTLLSFFFTFKKLSRTPLIFQRKERKRVGFCFRFRRSG*

Sequence

>CNT30444092
CCATCTTTCACCCTCCTCTCCTTTTTTTTCACCTTTAAGAAACTCTCGCGAACGCCTTTAATTTTTCAAAGGAAAGAAAGAAAAAGGGTGGGTTTTTGCT
TCAGATTTCGCCGGTCCGGGTAGGCGCGCGTGGTGTCTTGTTGGTCAGAACCGAACGATCTTGGCGGCGCGCACGACGGGGTTCTCCCTGGCGATGGCGT
CCCTGGCCGCCGACTTGTAGTCGTAGCTGCAGTCGTGCCGGTCCGAGTACCGGTGCGCGCCGCAGAACATCTCGCCGCACCGGCAGCGGAACCCCGTCAG
GCCCACGCGCTTCCGGCAGTTGTGGCAGCGGTTGACGGACGACTTGGACGCCTTCGGGTCCGCCGGCCCGGCGGCCGGCCGGTCGACGGCCATGTAGACG
GGCGCCGCCTGCAGCAGGGGCGACGCGACGGCGGCCGGCCTCAGCTTGTCGAAGAGCGGGAACGCCGCGGGCGAAGAGGAAGGGGACGGCGGCGAGGAGG
AGGACGCCAGGAAGCAGTTCTGGCAGAGGTTCTTGGTGGCCGGGTTGCCCGGGAAGCCGCAGCTGTTGGCGCAGAGCGTGATCTCCGCGGCGTGCAGGTG
CACCTCCGTCGGCTCCTCCACCTTCTTGTCCCGCTGCGCCATGACGCCTACGAGCCGAGAAAAGGTAGCTAGATGATCCCGCGCGCGCGAGGACGGCGAG
CTCTGCACCGCACGGTGGCCTGATCTCCTCGGAGGCCGGGCGTGAGCGGGAGATGGGATCGAGCGAGTCGAGGCGCGGCTCGAGGCTTTGGGGAAATGGG
GCGGAGGAG