Detailed information on CNT30443932


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Aegilops tauschiiSecale cereale11.3675.5995.03161forward
CNT30226134Aegilops tauschiiHordeum vulgare25.1930.2390.76357forward
CNT30399224Aegilops tauschiiTriticum turgidum72.6991.3191.751030forward
CNT30669040Aegilops tauschiiTriticum dicoccoides55.1963.0195.52782forward
CNT30459409Aegilops tauschiiSaccharum spontaneum10.0240.1185.92142forward

Expression of CNT30443932

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVVSTGRTIMCLPEPPIDAPCEVMLTFSFLFGKVME*

>peptide 2 (97 aa)
ESKQICHSVPTTALSLPLRLRLRLPSDFSLAEKPIPGSSSRQPPIFHYSIAPARVPAAFMESAAACRSFTSRLLGPPRLPQPGVLCLGRVWPPAPRV*

>peptide 3 (74 aa)
PRVNKSAILYPRLLFPSPSASASAFPPTFPSPKNQFQAPAAGNLQFSIIVLPPLGFQPPSWNPRPPADPSPAAF*

>peptide 4 (44 aa)
MGHHKRDFLASCAVAVSSLLTPFARLQCEIGNLVRKCLNDPING*

>peptide 5 (36 aa)
MGRCLRGADWEVETSWNPCSQAEAKLAICHCSCESA*

>peptide 6 (32 aa)
MVELGHLSLLKYVEGYWERILNFENLFPDVKL*

>peptide 7 (32 aa)
MDCWSRNLARHSAGVVKVDGEPLQGDVVPFFL*

Sequence

>CNT30443932
CCGAGAGTAAACAAATCTGCCATTCTGTACCCACGACTGCTCTTTCCCTCCCCCTCCGCCTCCGCCTCCGCCTTCCCTCCGACTTTTCCCTCGCCGAAAA
ACCAATTCCAGGCTCCAGCAGCAGGCAACCTCCAATTTTCCATTATAGTATTGCCCCCGCTAGGGTTCCAGCCGCCTTCATGGAATCCGCGGCCGCCTGC
AGATCCTTCACCAGCCGCCTTTTAGGACCGCCTCGCCTCCCGCAGCCGGGAGTGCTTTGTCTTGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTA
TTGCATGTGGTGGCACCAAGCATGAGGCGACAACTGCATTACTTGCAAGGAAGTTACAAAATCTATGGGTCATCATAAGCGTGACTTTCTTGCAAGTTGT
GCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCCAGACTGCAATGTGAAATAGGAAATTTAGTCAGGAAATGCCTAAATGATCCAATAAATGGTTGAA
TTGGGCCACTTATCTCTTCTTAAATATGTTGAAGGATATTGGGAACGTATTCTTAATTTTGAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCT
CTATACTTAAAAGAGTACTAGTGGATTAAGGATACAAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTACCAGAACC
TCCAATTGATGCACCATGTGAAGTCATGTTGACATTTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTGTTTCCCCTAGTATTGTGTTAGTGGTGT
ATATATTCACTAAACAAGGTTCTTCCATACCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGTTGAGGTGGTGGAGATTAGCAGGCAGCAG
TCTTTGTGGCGTTGATGGGGAGGTGTCTTCGCGGTGCTGATTGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTG
CCACTGCAGTTGTGAATCAGCATAAGAGATGGCACACTTCCGGTGTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTTGGAGCCGCAATCTCGCT
CGCCACTCTGCAGGGGTTGTTAAGGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGCCATTTTTTCTTTGAAAAAACTCAGACTTTATTCATCTGTAAT
AAGTAATAAGTGCATCATTTGTGAGGAGCATTACAATTTCATTTAAAGGCTCCTCAAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGA
TGTAGTGGCAGAGGAAAGGCTGACGGGACGAAATGACCCTCCTTGCTTGATCAGGTTATGTATGGTGTTCCTGGTGGTGATGGAGTTGGGCACGGTCTGA
AACCGATCACATGGAAG