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Detailed information on CNT30443837


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305219Aegilops tauschiiTriticum aestivum101.3985.1193.961092forward
CNT30398888Aegilops tauschiiTriticum turgidum80.598.9792.85867forward
CNT30668156Aegilops tauschiiTriticum dicoccoides101.3978.8493.961092forward
CNT30688313Aegilops tauschiiTriticum urartu40.6746.5597.72438forward

Expression of CNT30443837

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGRCLRGADWEVETSWNPCSQAEAKLAICHCSCESA*

>peptide 2 (40 aa)
MGHHKRDFLASCAVAVSSLLTPFARLQCEIGNLVRTCFQM*

>peptide 3 (36 aa)
MVVSTGRTIMCLPEPPIDAPCEVMLTFSFLFGKVME*

>peptide 4 (34 aa)
FRTASPPAAGSALSWARLAACAEGLSYCMWWHQA*

>peptide 5 (32 aa)
MDCWSRNLARHSAGVVKVDGEPLQGDVVPFFL*

Sequence

>CNT30443837
TTTTAGGACCGCCTCGCCTCCCGCAGCCGGGAGTGCTTTGTCTTGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAA
GCATGAGGCGACAACTGCATTACTTGCAAGGAAGTTACAAAATCTATGGGTCATCATAAGCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCT
TGCTGACTCCGTTTGCCAGACTGCAATGTGAAATAGGAAATTTAGTCAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCTCTATACTTAAAAGA
GTACTAGTGGATTAAGGATACAAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTACCAGAACCTCCAATTGATGCAC
CATGTGAAGTCATGTTGACATTTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTGTTTCCCCTAGTATTGTGTTAGTGGTGTATATATTCACTAAA
CAAGGTTCTTCCATACCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGTTGAGGTGGTGGAGATTAGCAGGCAGCAGTCTTTGTGGCGTTG
ATGGGGAGGTGTCTTCGCGGTGCTGATTGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTGCCACTGCAGTTGTG
AATCAGCATAAGAGATGGCACACTTCCGGTGTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTTGGAGCCGCAATCTCGCTCGCCACTCTGCAGG
GGTTGTTAAGGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGCCATTTTTTCTTTGAAAAAACTCAGACTTTATTCATCTGTAATAAGTAATAAGTGCA
TCATTTGTGAGGAGCATTACAATTTCATTTAAAGGCTCCTCAAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGATGTAGTGGCAGAGG
AAAGGCTGACGGGACGAAATGACCCTCCTTGCTTGATCAGGTTATGTATGGTGTTCCTGGTGGTGATGGAGTTGGGC