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Detailed information on CNT30442203


BLAST search results

BLAST vs Swiss-Prot:
sp|A3F5L3|DES2_SORBI, E-value = 4e-160

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694665Aegilops tauschiiOryza sativa17.3554.5785.34191forward
CNT30670880Aegilops tauschiiSetaria viridis13.9971.9695.45154forward
CNT30518041Aegilops tauschiiJuglans regia10.1720.5583.93112forward
CNT30617758Aegilops tauschiiSesamum indicum5.0924.3591.0756forward
CNT3021318Aegilops tauschiiCitrullus lanatus17.4421.7282.81192forward
CNT30304072Aegilops tauschiiTriticum aestivum86.1986.8399.79949forward
CNT30225510Aegilops tauschiiHordeum vulgare27.0710094.63298forward
CNT30395404Aegilops tauschiiTriticum turgidum32.0698.8896.88353forward
CNT30559187Aegilops tauschiiActinidia chinensis18.1742.3782200forward
CNT30589659Aegilops tauschiiMusa acuminata11.8145.1493.08130forward
CNT30254552Aegilops tauschiiAvena sativa15.3537.8994.67169forward
CNT30666984Aegilops tauschiiTriticum dicoccoides85.8397.3296.83945forward
CNT3075396Aegilops tauschiiBrassica juncea16.6240.1382.51183forward
CNT30139418Aegilops tauschiiLolium perenne44.6944.0189.23492forward
CNT30650498Aegilops tauschiiRosa chinensis11.7222.8781.4129forward
CNT30364958Aegilops tauschiiSorghum bicolor44.8742.7387.45494forward
CNT30323306Aegilops tauschiiAsparagus officinalis7.2720.158580forward
CNT30120535Aegilops tauschiiCitrus clementina9.7224.683.18107forward
CNT30575207Aegilops tauschiiOryza barthii35.8834.889.87395forward
CNT30583774Aegilops tauschiiEchinochloa crusgalli50.6832.6986.74558forward

Expression of CNT30442203

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLLLTTKKHRWSDGTNEVIMYSYHNRSRTEQYILAA*

>peptide 2 (78 aa)
MTQTPVMDHVGEGLDDRALEAVRRDCLLDLTQRERRFVRRRALVGCAAVGTAELLLLLPLLLRHPAAGTHVAADNKKA*

Sequence

>CNT30442203
GTGGCGTCGAAGTGGTAGTACTCGCCGAGGATGGGCTTGATCGCCTTGGTGGCCTCCATGGCGTGGTAGTGCGGCATGTTGGAGAATAGGTGGTGTGCCA
CGTGCGTGTCCGTGATGTTGTGGAACACGCGGTTGAGGATGCCGTAGTCCCGGTCCATGGTGGCGAGCGCCCCACGCAGCCAGTCCCACTCCGTCGAGTC
GTAGTGCGGCAGCGCCGGGTGGGTGTGCTGCAGGTAGGTGATCAGGACCAGCCACGCGTTCACGATCAGCAGCGGCACGCCGTACACCCGCACCACCCAC
CAGAACCCGAACGACGACACAAGCTTCAGCAGAGCCAACGACACGGCCAGCACTCCCACGTCTGAGATGAAGATCTGAGCGCGCTCCCGGTCGTTGTAGA
TCGGGCCGTAGGGGTCGAAGTGGCAGGCGAAGCGCGGGTACGGGCGGCCCGAGGCGTTGAGCGCCAGGTACAGCGGCCACCCGAGGGTGAGCTGCACGAC
GATGTGCACCAGACGGCCGATGGGGTTGTTGTAGATGTAAGGAGTGTACCACGCCAGCGCCTCCTTCTGCTTGGGGACGAACACCTCATCACGCTCCAGC
GACCCGGTGTTGGAGTGGTGGCGACGGTGGCTGTACTTCCACGAGAAGTAGGGGACGAGCAGCCACGAGTGGAGCACCAGGCCGACGGTGTCGTCGAGCA
GTGAGTAGTCGGAGAAGGCGTGGTGGCCGCACTCGTGGGCAATGACCCAAACGCCGGTCATGGACCACGTAGGAGAAGGACTTGATGATCGAGCGCTGGA
AGCAGTGAGGCGGGATTGCCTTCTTGATCTGACCCAGCGTGAACGGCGGTTTGTCCGTCGGCGAGCGCTGGTAGGCTGCGCCGCCGTTGGCACGGCCGAG
CTGCTCCTGCTTCTCCCGCTCCTTCTCCGTCATCCTGCCGCCGGCACCCATGTTGCTGCTGACAACAAAAAAGCATAGGTGGTCAGATGGCACGAACGAG
GTTATAATGTATTCTTATCATAATAGATCAAGAACAGAACAGTATATTCTAGCAGCATGATTCTACAATATTGCTATGAACGAAAATATCTATTAAGCTG
A