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Detailed information on CNT30441579


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 5e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30667282Aegilops tauschiiTriticum dicoccoides23.1170.1196.47312forward

Expression of CNT30441579

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MEVHVHPPVDCSKSKKQTRHLNQQILTFHRKLLYYRQHTSRLPQ*

>peptide 2 (36 aa)
MKMSLCKPAALNLHGRLDIQRAAPYRAMLHLNQALE*

>peptide 3 (29 aa)
MEVPVHPPVDCSKWKEQTRLAKPFRNSKL*

Sequence

>CNT30441579
CTTAGACAAGAGAGGAAATCTTTCCTATCTTCCATTGGAAGCACAGTTCGGAGATGACACAGGACACCGCGAGGGACATTGAGAAATCAACACTGCCAAG
GGTATGAGCCCTACTGCCCTTACGCAGTACTAAAACAGAACGAAACACAAACTGACCGCGCTAAGCGGTTTCACCCCTCGAGACGCCTTCAGAAACAGTA
AGCTATAGCCAGAATGGAAGTTCCTGTTCATCCACCAGTGGACTGTTCTAAATGGAAAGAACAGACAAGACTTGCTAAACCTTTCAGAAACAGTAAGCTA
TAGCCTGAATGGAAGTTCATGTTCATCCACCAGTGGACTGCTCTAAATCTAAAAAACAGACAAGACATCTAAACCAGCAAATTCTAACTTTCCACCGGAA
ACTACTATATTATCGCCAGCATACATCCAGACTGCCACAATAAAGTGGAGAAAACTTTGGTTTCCCCAAAATACAATGAAAATGAGCCTATGTAAACCCG
CAGCACTGAATTTACATGGGAGGCTGGACATTCAGCGCGCTGCTCCATACAGAGCCATGCTCCACCTAAATCAAGCCTTAGAATAACAAGTCAAAGCTGA
AACAATGTGGAAATTATAAGGATCAATCATCAGTTGCTCCATTGATCTTAACAACAGACCACAGCACTATTATTTCAGTTCACCAATTGCCGCCAGCAAA
CACGCCCTCAGATTATTATTTGACGGTCATACGCAGGGAGCAACAAGATACAGACACACACGGTGGAGCTGCTGGTCACAGGAGGATACGATAGTAGCTG
AGGACGGAAGAGGGGTGCCGGTGGCCGAATTGACTTCACATCAGGCGGCGAGGCGGGCGACGACGGGGTACTTGGCCTGGAACTTGGACTCCCAGTCGGC
GAGCACGCCGAGCTCCTTGTCGGAGAGGCCGGAGAGGTCGCCGGAGACGTCGGCGGCGTCCTTGGACATCTTGGCGAGCGCGCGGGCGGCCTCGCGGCCG
GCGAAGAGCGCGTAGTCGCCGCCGGGCCCGTAGAAGCCGCGCCCGGCCGAGACGTCGAAGACCTTGCCGCGGATGGCGACGTAGATCGGCTTGGACGCGT
CGGTGCCGTCGTACGCCCGCAGCTGCGCCGCCGTCAGAGCTCCGTCGCCATCTCGATCTCCCTCTGCGCGCTGCGCGTGGTAGGTGTGTTGCGAGTGAGG
CTGTGGGTGGGGTGGGGGAGAGGGAGGGGGGTGGGCTGGGGGTGAAGAGCAGAGGTCTGCGTCGGCCACACGCTGACGGCTGAATTGATTCCTACGGGAT
GGGATGGGAGTGCCGCTCGGGAGCAGGAGGGGGCAAAGATTGTGAGCGGC