Detailed information on CNT30441345


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670582Aegilops tauschiiSetaria viridis29.5221.1688.7162forward
CNT30520004Aegilops tauschiiSetaria italica29.5212.1688.7162forward
CNT30190689Aegilops tauschiiSecale cereale81.964.4287.21172forward
CNT30302147Aegilops tauschiiTriticum aestivum48.138.8595.05101forward
CNT30225906Aegilops tauschiiHordeum vulgare57.1423.7687.5120forward
CNT30254530Aegilops tauschiiAvena sativa97.6221.8887.32205forward
CNT30461578Aegilops tauschiiSaccharum spontaneum28.119.2889.8359forward
CNT30139600Aegilops tauschiiLolium perenne32.3810.2710068forward
CNT30364978Aegilops tauschiiSorghum bicolor24.2911.5990.251forward
CNT30150238Aegilops tauschiiBrachypodium distachyon78.14185.37164forward
CNT30603698Aegilops tauschiiOryza punctata37.146.284.6278forward

Expression of CNT30441345

Peptides detected in this lncRNA

>peptide 1 (55 aa)
AGGGDLLMLLARGGGGDLLMFRARAGGGDLLMLRPRAGGGDLLMLRARAGGGDLL*

Sequence

>CNT30441345
GGCTGGCGGTGGTGACTTACTGATGCTTCTGGCGCGAGGAGGCGGTGGTGACCTGCTGATGTTTCGCGCACGGGCAGGCGGCGGTGACCTGCTGATGCTT
CGCCCACGGGCCGGCGGTGGAGACCTGCTGATGCTTCGCGCACGGGCAGGCGGTGGTGATCTGCTGTAACTTCGCTTCCTGGGAGACCGATCCCGTGGGC
TGTAGCTCCT