« Back to Aegilops tauschii search


Detailed information on CNT30441199


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618996Aegilops tauschiiSesamum indicum79.2516.5596.95787forward
CNT30712072Aegilops tauschiiGlycine max27.2942.7495.2271forward
CNT30637481Aegilops tauschiiCapsicum annuum29.4165.1896.58292forward
CNT3094274Aegilops tauschiiSolanum tuberosum21.3571.8698.58212reverse complement
CNT30221833Aegilops tauschiiHordeum vulgare94.5668.7997.87939forward
CNT30543278Aegilops tauschiiBrassica napus79.3629.1996.19788forward
CNT30508923Aegilops tauschiiSolanum lycopersicum30.3190.1298.34301forward
CNT30554477Aegilops tauschiiOryza glaberrima38.9753.5398.45387reverse complement
CNT30258490Aegilops tauschiiAvena sativa36.8650.6999.18366forward
CNT3067934Aegilops tauschiiLeersia perrieri22.5698.2595.98224reverse complement
CNT30202530Aegilops tauschiiHelianthus annuus58.2178.8597.58578forward
CNT30718256Aegilops tauschiiMalus domestica golden26.0884.6488.8259forward
CNT30369921Aegilops tauschiiOryza glumipatula22.8698.799.12227forward
CNT30484250Aegilops tauschiiChara braunii19.0326.0394.71189reverse complement
CNT30644906Aegilops tauschiiCannabis sativa20.8564.6990.82207reverse complement
CNT30320583Aegilops tauschiiAsparagus officinalis26.8924.34100267forward
CNT30118993Aegilops tauschiiCitrus clementina27.4977.5694.14273forward
CNT3099471Aegilops tauschiiOryza rufipogon19.2375.79100191reverse complement
CNT30557400Aegilops tauschiiPanicum hallii64.9547.0197.67645forward

Expression of CNT30441199

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

Sequence

>CNT30441199
ACGGCGGTAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGAC
ATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCT
TGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCAT
TCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCT
GCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGG
GCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCAT
CACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTA
TCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGC
AGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAG
GCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAATGGAAATTGACAACAATAAAAAAAACATAACTTAGAAAGAGAG