« Back to Aegilops tauschii search


Detailed information on CNT30441158


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 2e-166

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532226Aegilops tauschiiEucalyptus grandis44.9347.1685.34341forward
CNT30547574Aegilops tauschiiIpomoea triloba31.8868.1785.12242forward
CNT30512729Aegilops tauschiiJuglans regia96.3171.0480.85731forward
CNT30372986Aegilops tauschiiArabidopsis thaliana62.7146.5882.14476forward
CNT30276060Aegilops tauschiiChenopodium quinoa40.1848.1182.95305forward
CNT3019597Aegilops tauschiiCitrullus lanatus40.5841.1882.47308forward
CNT30728649Aegilops tauschiiCorchorus capsularis20.4214.2383.23155forward
CNT30488117Aegilops tauschiiOlea europaea32.2850.284.08245forward
CNT3045373Aegilops tauschiiPrunus dulcis74.5772.1979.86566forward
CNT30191304Aegilops tauschiiSecale cereale10058.3496.44759forward
CNT30300473Aegilops tauschiiTriticum aestivum94.273.8699.72715forward
CNT30224354Aegilops tauschiiHordeum vulgare68.3810095.57519forward
CNT30395070Aegilops tauschiiTriticum turgidum69.368.7694.68526forward
CNT30561656Aegilops tauschiiActinidia chinensis98.5553.4381.55748forward
CNT3085191Aegilops tauschiiVigna radiata21.2122.4583.85161forward
CNT30510505Aegilops tauschiiSolanum lycopersicum71.8150.1883.67545forward
CNT30143941Aegilops tauschiiMedicago truncatula33.4756.779.92254forward
CNT30309793Aegilops tauschiiCamelina sativa53.3652.0684.2405forward
CNT30605685Aegilops tauschiiGossypium raimondii58.3757.9884.42443forward
CNT30683923Aegilops tauschiiTriticum urartu69.4357.695.64527forward
CNT30345702Aegilops tauschiiEragrostis tef71.0166.7187.01539forward
CNT30361520Aegilops tauschiiSorghum bicolor40.4544.8884.69307forward
CNT30596122Aegilops tauschiiOryza meridionalis45.9850.4390.54349forward
CNT30359537Aegilops tauschiiLactuca sativa42.0348.4179.94319forward
CNT30369654Aegilops tauschiiOryza glumipatula55.7348.0788.89423forward
CNT30332479Aegilops tauschiiDioscorea rotundata18.5849.8285.82141forward
CNT30575986Aegilops tauschiiOryza barthii56.7936.4991.18431forward

Expression of CNT30441158

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MPRMFSSARAPSFDAHWNPATTESLISFRYCTPLHMSTTMLGPVVSGPKHQIFLARSLSHPNSSDRILERTLGSSRGPMRPSSIASANPSSNGRA

>peptide 2 (71 aa)
SLSSKSDRGVICSLRPFLLRISVTSVADWVPGSKGSEAMMSQWSNTHWGKAWPDVAALRVLENPKDSITGR*

Sequence

>CNT30441158
AGCTTGTCCTCGAAGTCGGATAGGGGGGTCATCTGCTCCTTGAGACCCTTCCTCTTGCGGATCTCCGTCACGAGCGTCGCCGACTGGGTGCCAGGGTCCA
AAGGATCGGAGGCCATGATGTCCCAGTGGTCAAACACACACTGGGGGAAGGCCTGGCCGGACGTCGCGGCCCTCAGGGTGCTCGAGAACCCGAAGGACTC
GATAACAGGCAGGTAGGCCTTGATGTTGTAGAGTGGGGTACCTTGCCTCTGCATCTCCTCGAACACGTGGCCTCTCTTCTGATTCAGCACACCATAGATA
CCACCAAGTGCGTTCTCCGGGGCCTGGATCTCAACCAGGTACACAGGCTCCAGCAGCCTTGGCTTGGCAGTGAGCTGAGAAGCGTAAATGACCCTCCTGG
CTGTTGGGATGACCTGACCACCACCCCTGTGAATAGCATCAGTGTGCAGAACAACATCACAGACCTCAAAGCAAATGCCACGCATGTTCTCCTCAGCCAG
AGCACCTTCTTTCGATGCCCATTGGAACCCAGCCACAACAGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTACACATGTCAACAACCATGTTGGGG
CCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCGAGATCCTTGTCCCACCCAAACTCCTCGGACAGGATCTTGGAGCGAACCTTAGGATCATCAC
GCGGGCCAATGCGGCCATCATCAATAGCCTCAGCCAATCCCTCCTCCAATGGGCGAGCT