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Detailed information on CNT30441099


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 3e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317753Aegilops tauschiiCorylus avellana55.0440.881.34284forward
CNT30703567Aegilops tauschiiQuercus lobata46.3247.3383.68239forward
CNT30616210Aegilops tauschiiSesamum indicum57.7523.8283.89298forward
CNT3069058Aegilops tauschiiQuercus suber43.4125.683.48224forward
CNT30186872Aegilops tauschiiSecale cereale92.6495.7995.19478forward
CNT30299936Aegilops tauschiiTriticum aestivum69.9666.1295.29361forward
CNT30394717Aegilops tauschiiTriticum turgidum69.9671.6395.29361forward
CNT3086297Aegilops tauschiiVigna radiata56.224.9483.45290forward
CNT30252143Aegilops tauschiiAvena sativa67.8333.8595.71350forward
CNT30664208Aegilops tauschiiTriticum dicoccoides61.6363.2297.17318forward
CNT30687044Aegilops tauschiiTriticum urartu61.4331.1195.9317forward
CNT30357929Aegilops tauschiiLactuca sativa55.0463.3980.99284forward
CNT30645456Aegilops tauschiiCannabis sativa49.2233.1284.65254forward
CNT30331117Aegilops tauschiiDioscorea rotundata59.332.3180.07306forward
CNT30147953Aegilops tauschiiBrachypodium distachyon60.0835.6796.13310forward
CNT30496126Aegilops tauschiiDigitaria exilis61.4346.6293.69317forward

Expression of CNT30441099

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MSPEMRFTPPRRARRRIAGLVMPWMLSRSTFRWRLAPPLPRPLPPLPRPDIFASPFSPVRLTCLCGSC

Sequence

>CNT30441099
AGGGTAAATAACTGCGATTTGATCCATTCCAGCGAACAAGCACCATACATCATAAATTACATCGATCACCGTGAACACTGAACAACGCCTAGCTACTGCT
AATCTGAACATCTGATCAAGTGGTGCGAGCTCGATTCGCCTCGCCGGAGCCTAGCCCCCGAATCCGTAGAGGGTGCGTCCCTGGCGCTTGAGGGCGTAGA
CGACGTCCATGGCGGTGACGGTCTTGCGGCGGGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGCACGCCGCGGGT
CTCCTCGTAGATGAGCCCCGAGATGCGCTTCACGCCGCCCCGCCGCGCCAGGCGCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCCCGCAGCACC
TTCCGGTGGCGCTTGGCGCCGCCCTTGCCCAGACCCTTGCCTCCCTTGCCGCGCCCCGACATCTTCGCTTCTCCTTTCTCTCCGGTGAGGTTGACTTGTC
TTTGTGGTAGCTGCGG