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Detailed information on CNT30436129


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289785Aegilops tauschiiTriticum aestivum34.8129.9799.09110forward
CNT30366141Aegilops tauschiiSorghum bicolor32.2814.7295.1102forward
CNT30576176Aegilops tauschiiOryza barthii34.1832.3499.07108forward
CNT30116652Aegilops tauschiiOryza nivara34.1830.4299.07108forward

Expression of CNT30436129

Peptides detected in this lncRNA

>peptide 1 (43 aa)
ESKLDGGTRQTASNDDSRHGWMDGRTTDAAASDEAASKSYSSS*

>peptide 2 (67 aa)
MGEHGRQQVTMTVDMDGWMDGRRTRRPATRQLVKATLVLEKSMVQFTTAPPPSAPLSVTCTVTLKFL*

Sequence

>CNT30436129
GTGAGAGTAAGCTAGATGGGGGAACACGGCAGACAGCAAGTAACGATGACAGTAGACATGGATGGATGGATGGACGGACGACGGACGCGGCGGCCAGCGA
CGAGGCAGCTAGTAAAAGCTACTCTAGTTCTTGAGAAGTCCATGGTCCAGTTCACCACCGCGCCGCCGCCGTCGGCGCCCTTGTCGGTCACCTGCACCGT
CACCCTGAAGTTCTTGTAGAAGCTGACCAGCTCGCCGTCCACCACGCTGTACGACACCACCTTCTTCTCGTCGTCCGCCACCTCCACCTTCTCCTTGGCG
AACGTCACCATCGGAA