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Detailed information on CNT30434666


BLAST search results

BLAST vs Swiss-Prot:
sp|P05621|H2B2_WHEAT, E-value = 5e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618877Aegilops tauschiiSesamum indicum36.133.6781.13265forward
CNT30283395Aegilops tauschiiTriticum aestivum91.2868.5897.01670forward
CNT30220727Aegilops tauschiiHordeum vulgare65.9462.0595.25484forward
CNT30383318Aegilops tauschiiTriticum turgidum91.2872.9196.57670forward
CNT30656221Aegilops tauschiiTriticum dicoccoides91.2876.4896.87670forward
CNT30136307Aegilops tauschiiLolium perenne39.5148.8295.52290forward
CNT30719869Aegilops tauschiiTriticum spelta78.2100.5397.04574forward
CNT30369169Aegilops tauschiiOryza glumipatula39.6550.7994.16291forward

Expression of CNT30434666

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVGFLLYLASLADSPASFSKMSLMKEFMMDMALEEMPMSGCTCFSTLKM*

>peptide 2 (48 aa)
QKDKKITSVLDRFHQYAKAATSVLTTNGPTKRWQSPSTGATTATTTCG*

>peptide 3 (34 aa)
MPKQQLQFLQPTGQQSVGNHPAQVLLLLPLLADR*

Sequence

>CNT30434666
CAGAAGGATAAAAAGATAACTTCAGTTCTAGATAGATTTCATCAGTATGCCAAAGCAGCAACTTCAGTTCTTACAACCAACGGGCCAACAAAGCGTTGGC
AATCACCCAGCACAGGTGCTACTACTGCTACCACTACTTGCGGATAGATAGATAAGCAGAGTCAACAGTACAGATGCAGATGCAGAAACCAACTGCACGC
CGTCAGTCTAGGAGGAGGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGAGGACGAGGCGGACGGAGGTCTG
GATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTACCTCGCGAGCTTGGCCGACTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATG
ATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTGAAGATGTAGATCTTGTACGTCTCCACGCCCTTCTTGGCCTTGC
TGCCCTTCTTCCTGCCCCGGGTCTTGGCCTCGCCGCCGGCCTCCTTGGACGCCGTCTTGCCCGCCGGCAGCCGCTTCTCGGCCTTGGGCTTCTTGCCCGC
GGGGGTCTTCTCCGCCGCCTTCTCGACCTTGTTCTCGGCCGCCGGCTTCTTGTCTGCCTTGGGGGCCATGGCTGCCGCTGGAGCTTCGGAGGTGGGGAGT
GAGGGAGAGGTGGGAGTGAGGAGGTGGGGAATTG