Detailed information on CNT30433485


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7X999|RCA2_LARTR, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712253Papaver somniferumGlycine max17.137.5587.2186forward
CNT30171766Papaver somniferumTrifolium pratense20.0812.0783.17101forward
CNT30144875Papaver somniferumMedicago truncatula11.1320.5989.2956forward
CNT30260989Papaver somniferumBrassica rapa19.0930.9787.596forward
CNT30621292Papaver somniferumCajanus cajan20.0811.1286.14101forward
CNT3038777Papaver somniferumCucumis melo20.0828.5383.17101forward

Expression of CNT30433485

Peptides detected in this lncRNA

>peptide 1 (76 aa)
SILKSLRSLSLAGVFIRTHDSIVSSSVHRSLEKGVNHSLSSGDVLLIIRLVVVKTGPFVLILFWIDLLCSNNFEAS*

Sequence

>CNT30433485
GTCGATATTAAAATCCTTACGTTCTTTGTCCCTTGCTGGCGTATTCATAAGAACTCATGATAGCATTGTGAGTTCCAGTGTCCATAGGAGCTTGGAAAAG
GGAGTCAACCATTCCCTTTCCTCTGGTGATGTCTTGTTGATCATCAGACTGGTCGTAGTAAAGACCGGCCCATTTGTCCTCATTCTTTTTTGGATCGACC
TCTTGTGCAGCAACAACTTTGAAGCTTCTTGAGGATGGTTTTGGTGCAACAGAAGAATTGACCTTCTTCAAGCTGCTGCCCAAGAAGGCAGAGCTTTGGC
CAGAGCTTGGCAAGCTCAACTGTGCTCTGTTAACTGCTCCAACGGTTGAGAAAGCAGCAGCCATTTCTGATCAGACTTCTGCAATCAAACTCGAAAAGAG
TGATTACTTGTTCTGTAAAAGATAGCAGCAGAGTTTGCAAAGTTCAAGAAAGATAAGGTGAGGAGTGGAGTGTGTAAACAGAAGTGAATGAGATATAAAG
AGG