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Detailed information on CNT30428061


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 3e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269143Papaver somniferumChenopodium quinoa17.7332.6982.68254forward
CNT30525887Papaver somniferumPhaseolus vulgaris8.5132.6283.61122forward
CNT30356274Papaver somniferumLactuca sativa29.4564.7280.81422forward
CNT30724196Papaver somniferumLupinus angustifolius16.7528.8584.58240forward
CNT3049718Papaver somniferumCucumis sativus18.1449.8181.92260forward

Expression of CNT30428061

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKILNFTIRENPVKLVLDLVLRSQSSSKS*

>peptide 2 (46 aa)
MPCSQKEKKEKKEKVEGKIVFSATPDSHSHYLVFGDILEQRKPAHP*

>peptide 3 (41 aa)
MERCGAAKLNGLGLANDTVEDCFHAKLFDFEVERVGVKRAA*

Sequence

>CNT30428061
TTAGATTGGCTCTACTCATTTTTGTAACCCAGACTTCTTAAGAGTCTTAATTTTTAATGAAATGCCTTGTTCACAGAAAGAGAAAAAGGAAAAAAAAGAA
AAGGTTGAGGGTAAAATAGTATTTTCGGCGACACCCGATAGCCATAGCCATTATCTTGTTTTTGGGGACATCCTAGAGCAGCGCAAACCAGCACACCCCT
AGGTGCGAAAACCATTTGTCTTGATCAAAGTTAGCTAAATACTTAAGAGTTAAGAAGATTAAGACTATCCAGTTGAATCGAAATTATACAGTAATCCACA
TGTTTAATGGTAGCTTTAGAACATAAAAATACAAATTAAGTTCAAACAATAATTTCATTACATAATCACACAAAACACATAAAAAGTTATCTCATCACAA
ATCATAAGCTTGTTTTCCAGTGAACTTAACTTCAATAGGGCTGACATTCTTTCCGATAGACCTGAAGTTTTGTCCGACTCCTTGACGTCCTGGGTTCACC
TTCTCTGGGTACACACCATCTTTAGGATGAAGATATTGAACTTCACCATTAGGGAAAACCCTGTAAAATTGGTACTTGATCTTGTACTTAGATCTCAATC
TAGTTCCAAGAGCTAAACACTGTTCTTTCCTAGCCAACTTGAGCAAGTTAGGTCCTTGTCTCATGATAGCTGCACCTCCAGTTGGCATTTCAAATACTTG
CTCTTTAGGAGAATCCCAAGTGATCACGTAGAACTCCTCTACTTGAGCTTTACGTAACAATCCACCAGTACTACCTCCGAAGATCGGAGATGGTGTGTTT
GGGTCCAATTCTGGTGGGGTGAAACCTGCTGGGGCTTCTTTCGCTGGAGCTTCTGCCTTTCCTTCAGCAGCTGAGGCCTTGATGGAACGCTGTGGCGCAG
CAAAGTTGAATGGTTTAGGGCTAGCGAATGACACAGTTGAGGATTGTTTCCATGCTAAATTGTTTGATTTTGAGGTGGAAAGAGTTGGGGTAAAAAGAGC
TGCTTGAGTTGCCATGGCCATGGAATATTCAAGAGGTAGTTGATTTCCTCGAGCTGCAGTAGGTTGTGTGGTAAGGTCACAGAGAAGATGTAAAGAAGAG
TGTTTTATGAAATTTGATGAGTGGTGGATAAAAACTAGATGGATAAGGTGAGATTTGGTCTGAACCAATAAAAGCATATGTTTTTTATATGAAATCTTAC
CCATACCACATTGATATTTTTGTAGTTTTCTTTCTTGGTCCACATCTTTTCTGAATCACTAGATTTTCTTGTTTTCTGATTCTTCTCTCAAGTTCGGAGG
CTTAATCTGGTCCTTTGGTTTTACTTTGTTTGCATACAGAAAGCTTCAGAGAGTTGTTCATTCCTTAGATTCCGAATAGTGGATAAAAATATTTTTTACC
TAGCAAAGCCTTAATCTTGAACTTGGACCAAAT