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Detailed information on CNT30414711


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 3e-50

BLAST vs NONCODE:
NONBNAT006984, E-value = 4e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546681Papaver somniferumIpomoea triloba18.7238.0979.33179forward
CNT30701199Papaver somniferumQuercus lobata21.2318.4282.27203forward
CNT30375418Papaver somniferumArabidopsis thaliana10.5642.887.13101forward
CNT30195393Papaver somniferumPisum sativum19.7729.3585.71189forward
CNT30504865Papaver somniferumNicotiana attenuata14.4426.9584.06138forward
CNT30712284Papaver somniferumGlycine max14.0228.5183.58134forward
CNT3092650Papaver somniferumSolanum tuberosum10.042587.596forward
CNT30172429Papaver somniferumTrifolium pratense22.4933.2384.65215forward
CNT3059678Papaver somniferumArabidopsis lyrata16.8433.4783.23161forward
CNT3082467Papaver somniferumBrassica juncea23.9531.9479.04229forward
CNT30261175Papaver somniferumBrassica rapa22.745.9779.26217forward
CNT30611328Papaver somniferumArabis alpina18.4138.685.8176forward
CNT30211420Papaver somniferumHelianthus annuus17.8934.4883.63171forward
CNT30619612Papaver somniferumCajanus cajan17.1539.1484.15164forward
CNT30360323Papaver somniferumLactuca sativa14.1238.5785.93135forward
CNT30645368Papaver somniferumCannabis sativa13.0837.7680.8125forward
CNT3024855Papaver somniferumPopulus trichocarpa23.5438.3382.22225forward
CNT3050826Papaver somniferumCucumis sativus17.8950.1583.63171forward

Expression of CNT30414711

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PQELLKQREKYKIRRTHVYTRINSSMRTTIMLYTRRRAWRHLAR*

>peptide 2 (38 aa)
MFSVSNSITNHILKEDLKNTTSLFINQSTDTFHSTSPC*

Sequence

>CNT30414711
GTCCCCAAGAGCTTTTAAAACAGCGAGAGAAGTATAAGATCAGACGAACTCATGTGTATACAAGAATTAATAGCTCCATGAGAACAACCATTATGTTGTA
TACAAGAAGAAGAGCATGGAGACATTTGGCCAGATGAGTACTACTACTTTTGGTGCAGGAAAATGAATAGTCTACTGAACTCAAATTCATAGTTGGTTCT
AGTTTGGTCAAATAACATTAGCTGATTTTGAAATTGTTCGATGCAAAATTTGAAAATCAGTGAAAAGATTGAACCTAAGGAATTAGATTTGGATTTGAGC
AAAAACATAAACTGAAGAACAAAGAGATAAAAGCTCATACCAGTAATTCATTCAGATAGAACACCAATTGTCAATTGAATTGCGCAAACACAATTTTGCT
TGAATAAACAGAAAAACAAGAATAAAAAGGATTAAATTAGACAAATTAATGAAACAGAAACAAGTAGATTACTGATGTTCAAAACATTTCACATTCATAA
AGTTAATTTTCCCAGGTAGGTACATGTGAAACCCAAAAAGAAACCCTAGATCTACATATTTTTACAAACCCTGACTAACCCCCAAATCCATAGAGAGTTC
TTCCTTGCCTCTTGAGAGCATAGACAACATCCATAGCAGTGACAGTCTTCCTCCTAGCATGTTCAGTGTAAGTAACAGCATCACGAATCACATTCTCAAG
GAAGATCTTAAGAACACCACGAGTCTCTTCATAAATCAATCCACTGATACGTTTCACTCCACCTCTCCTTGCTAAACGTCTGATTGCTGGCTTTGTGATT
CCCTGGATATTGTCTCTCAACACCTTCCTGTGCCTCTTTGCTCCTCCCTTTCCCAAACCCTTTCCTCCTTTTCCTCTTCCTGACATTTTTTGTCTACAGA
ATTATTTTTCTTCTTTTTCTCTGGTTTTTGATTTGATTTGTGATTTTGGGAAGAAG