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Detailed information on CNT30410880


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678637Papaver somniferumSetaria viridis42.3894.5894.79384reverse complement
CNT30524663Papaver somniferumSetaria italica49.8977.6690.93452forward
CNT30641615Papaver somniferumNymphaea colorata49.7881.4197.12451forward
CNT30494210Papaver somniferumOlea europaea23.298.6482.46211reverse complement
CNT30294119Papaver somniferumTriticum aestivum30.24100.3795.26274reverse complement
CNT30220355Papaver somniferumHordeum vulgare31.3594.9896.13284forward
CNT30657980Papaver somniferumTriticum dicoccoides44.3798.5395.02402reverse complement
CNT30720843Papaver somniferumTriticum spelta25.06105.5885.46227forward
CNT30347837Papaver somniferumEragrostis tef70.9783.491.76643reverse complement
CNT30363261Papaver somniferumSorghum bicolor47.934.0990.32434forward
CNT30620564Papaver somniferumCajanus cajan84.1114.7297.77762reverse complement
CNT30354697Papaver somniferumLactuca sativa50.7765.1696.74460forward
CNT30481523Papaver somniferumChara braunii7.1727.0896.9265reverse complement
CNT3036965Papaver somniferumCucumis melo80.2499.8698.62727forward
CNT30331560Papaver somniferumDioscorea rotundata35.5463.7693.17322reverse complement
CNT30604015Papaver somniferumOryza punctata55.74104.5591.88505reverse complement
CNT30174498Papaver somniferumVigna angularis43.8278.6196.22397forward
CNT30551087Papaver somniferumOryza brachyantha33.22101.0187.71301reverse complement

Expression of CNT30410880

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKHWVAKCGADNC*

>peptide 2 (29 aa)
MTRSIRSGTRHLFSLFNSLTTRKNHCSTL*

Sequence

>CNT30410880
AAGAGCTAGAATTCTAACCTTGTGCCAGGACCCACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAG
ATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGG
AAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGC
TCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTC
CATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGT
AAACACTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAAAG
CCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATCCAAGAGAAGGTCACGGCGAGACGAG
CCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAACCTTGTTCCTACATGACC
CGATCAATTCGATCAGGCACTCGCCATCTATTTTCATTGTTCAACTCTTTGACAACACGAAAAAACCATTGTTCAACTCTTTGACAACATGAAAAACCAA
AAGCTC