CANTATAdb - search

Detailed information on CNT30403790

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30195806	Beta vulgaris	Pisum sativum	21.57	21.54	78.98	176	forward
CNT30112510	Beta vulgaris	Ficus carica	13.6	22.16	83.78	111	forward

Expression of CNT30403790

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLLSLLSPTMGTVMARLLKRTSHSRKEEPELQRKEGSRRRKELVIKKCYF*

>peptide 2 (40 aa)
MMILYEYTKRLDSDRTYESTLSFARESTMVHSAGPRISSN*

Sequence

>CNT30403790
GGGACACTGAAAAGATAACCATAAAATCAGGTTCAAGACCGGACTCTTATTTCAAAAAAAAAAAAAGATGGAACACATAAAATGAAGTACTAATTCATTT
CTTCTTCTTTTTTCTCCTCTTTCCAGAGGCATTTCAGAGCAGGCTTGGTAAAACCAATCATAGTTGTAGCCTTGCAGAACTTCTGGTAGAATACAGAAGC
ACCAAAGCCAAGCTCTTCAATGCCACCCTCTTCACGACTGTAACCGTTGGCGTTCACGGTACAGTTTTGCTCCATTGGATAGGCTTGCAGCCAACTTCAA
AATAGGTGGGATTGCAAGGAGCAGCTTCGTAGTCCCACAAGTTTTAATGATGATCTTGTATGAGTACACAAAGAGGCTAGACTCAGATAGAACATATGAG
TCTACACTTTCATTCGCAAGAGAGTCAACAATGGTGCACTCAGCAGGGCCAAGGATCTCATCCAACTGATCCTTAGATAAAGCACGGAGGCCCTTCCCGT
CAGAATCAACAAAAATACCAGGCTCAAAGAACGTTATCTCTAGCCTCTTTTCATACCCTTCGAATCCAATAGCAGAAATCGTCATGTTGTTGTCGTTGTT
GTCTCCAACCATGGGAACCGTCATGGCTAGATTGCTTAAAAGAACGTCTCACAGTCGCAAAGAGGAACCGGAGTTGCAGAGGAAAGAGGGAAGCAGAAGA
AGAAAGGAACTTGTAATCAAAAAGTGTTATTTCTAATGCAAAAATTAAAACTAAATTAAACCACTTCACGTGGTCGAGCAGGCGGTGCACGGGGAATATC
AGGATGGTTTGCGAGC