Detailed information on CNT30403648


BLAST search results

BLAST vs Swiss-Prot:
sp|P12353|PSAD_SPIOL, E-value = 2e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Beta vulgarisNymphaea colorata18.5848.2483.01206forward
CNT30515406Beta vulgarisJuglans regia20.6545.0883.41229forward
CNT30371945Beta vulgarisArabidopsis thaliana21.0154.1979.4233forward
CNT30269143Beta vulgarisChenopodium quinoa22.7232.4388.89252forward
CNT30380725Beta vulgarisManihot esculenta22.6342.5486.85251forward
CNT30630495Beta vulgarisVigna unguiculata20.7440.5683.91230forward
CNT30505774Beta vulgarisNicotiana attenuata15.636.1985.55173forward
CNT30710333Beta vulgarisGlycine max21.2827.1384.32236forward
CNT3094391Beta vulgarisSolanum tuberosum10.1925.8683.19113forward
CNT3089114Beta vulgarisVigna radiata19.9322.9783.71221forward
CNT30171560Beta vulgarisTrifolium pratense21.5529.6582.85239forward
CNT30145740Beta vulgarisMedicago truncatula22.6331.1883.67251forward
CNT3061459Beta vulgarisArabidopsis lyrata21.0139.7680.69233forward
CNT30651308Beta vulgarisRosa chinensis12.6224.3188.57140forward
CNT30477818Beta vulgarisArabidopsis halleri16.9540.1780.32188forward
CNT30619829Beta vulgarisCajanus cajan21.4624.1484.87238forward
CNT30358694Beta vulgarisLactuca sativa20.4751.0182.82227forward
CNT30411270Beta vulgarisPapaver somniferum22.6344.7485.26251forward
CNT30113105Beta vulgarisFicus carica20.7428.7580.43230forward
CNT3049718Beta vulgarisCucumis sativus21.4645.5982.35238forward

Expression of CNT30403648

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MITSNHLVNIVGKPQFIVIVFAYIKIETTLILKSVMLYIKFKTLWKLKYNKDTRVLQNFNLCFLFGFYTLKFQLLFCILCHYNITLPLI*

Sequence

>CNT30403648
CCATCTTTAGGGTGCAAATATTGAACTTCTCCATTAGGGAAAACCCTGTAAAATTGGTACTTGATCTTGTATTTTGACCTAAGCCTTGTTCCAAGTGCCA
AACACTGCTCTTTACGAGCCAACTTGAGCAAGTTAGGGCCTTCCCTCATGATGGCTGCACCACCAGTTGGCATCTCAAATATCTGCTCCTTTGGTGATTC
CCATGTGATCACATAAAACTCCTCCACTTGTGCCTTCCTCAACAATCCACCTTTAATACAAATCAATACTTATATTACTTCATTCATTTAGCCTTGTTTA
ACAATCAGCTATTAAAGTATACACTCGTCTGGTTACCTGATCCACTTAATTAAGTAGCACAATCGATAAGCTATCTGTATTAATTGTATTAGTTATTTGT
ATAAAAGATGTTTATTATAATTAGCTAATAGAAATTTGTCCAAAATAGGTATAGAATTACATTTAAGTACATGATCACGTCTAACCACTTAGTGAATATA
GTTGGTAAACCACAATTCATAGTTATTGTATTTGCCTATATCAAAATTGAAACAACACTTATTTTAAAATCTGTCATGCTTTACATAAAATTTAAAACTC
TTTGGAAATTAAAATATAATAAAGATACTAGAGTTTTGCAAAATTTCAACTTATGTTTTCTTTTTGGATTTTATACCTTAAAATTTCAACTTCTTTTTTG
TATTCTATGCCACTATAACATTACGCTACCCCTCATTTAAAATCTTGGATCCGCTCCTGATCGGATATATATGCAAATATACGCAAATCATGTGTACACG
TAGAAGTTAATTTTTTAAGGCTAAAATCATACCTGTGCTGCCTGCGAAGATTGGAGAGGGAGTGTTTGGGTCCAATTCTGGTGGGGTGAAACCTGCAGCC
GCCCTGATGAAGTGGCGGGTGGCAGGTTTGGCGGAGAATGAGAGTGTGGAGGATGATTTGAAAGAGGATGATAGGCGGTGATCAGTGGGTTTTGCAGAGG
AGAGGGAAGACGGAGCAAAGAGCGCGGCTTGTGTAGCCATTGCCATTGGTAGTTTTGGAGGGAGTGTAGAAGAGGAGAGGACTTTGAGGAGTGTTATTGT
TTTGTGGCC