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Detailed information on CNT30401458


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6YZY5|GL811_ORYSJ, E-value = 6e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297939Triticum turgidumTriticum aestivum94.797.1591.73375forward
CNT30223426Triticum turgidumHordeum vulgare98.9949.7591.33392forward
CNT30586666Triticum turgidumMusa acuminata27.7814.3482.73110forward
CNT30240637Triticum turgidumAvena sativa47.2248.0783.96187forward
CNT30665054Triticum turgidumTriticum dicoccoides96.9745.6691.93384forward
CNT30469790Triticum turgidumSaccharum spontaneum68.6925.5483.46272forward
CNT30140763Triticum turgidumLolium perenne27.7839.2987.27110forward
CNT307812Triticum turgidumZea mays47.4722.281.91188forward
CNT30688823Triticum turgidumTriticum urartu99.4938.3693.4394forward
CNT30572973Triticum turgidumVitis vinifera21.4611.7685.8885forward
CNT30117328Triticum turgidumOryza nivara72.9862.4280.97289forward

Expression of CNT30401458

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MRAIEMPRVLSPAICMTLIKVTLDPTLLVTLGLSRAAALKKSSALTSIGFLQTNPLTCTGCIE

>peptide 2 (66 aa)
GLNWKWMSPTGKTNTSPLLSTFEKNLFLAGAGRLDVTKPTYNVPSSTVRISVARGCVCGGFWPKGE*

Sequence

>CNT30401458
TAGGGTTGAATTGGAAGTGGATGAGCCCCACAGGGAAGACAAACACATCACCTTTGTTGAGCACCTTTGAGAAGAACTTGTTTCTGGCTGGGGCGGGCAG
GTTGGATGTGACAAAGCCAACGTACAATGTTCCCTCGAGCACCGTGAGGATCTCAGTGGCGCGGGGGTGCGTGTGTGGAGGGTTCTGGCCTAAGGGAGAA
TAGTCGATGCGTGCGATTGAGATGCCGAGGGTGTTGAGTCCAGCAATCTGCATGACATTGATCAAGGTGACGTTGGATCCAACCTTGTTGGTCACCCTAG
GCTTATCGAGGGCGGCTGCCTTGAAGAAGTCATCAGCGTTGACCTCCATCGGGTTCTTGCAAACAAATCCATTGACATGCACTGGGTGCATAGAAG