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Detailed information on CNT30400944


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30303239Triticum turgidumTriticum aestivum26.4231.5510065forward
CNT30666847Triticum turgidumTriticum dicoccoides26.4226.110065forward
CNT30686076Triticum turgidumTriticum urartu26.0222.7810064forward

Expression of CNT30400944

Peptides detected in this lncRNA

>peptide 1 (51 aa)
VLCGGGGGGGVRALERDHLLLAGVSRGRHRSLAAAAAAGSGSGIGDRETKP*

>peptide 2 (80 aa)
SSAGAAGAAASELLSVIIFFSPASPAAAIARSLLLLLLDPDRGSGIGRRNPRTGAAAATDGRGKSWELWWVRGGLVGSARV

Sequence

>CNT30400944
GTCCTCTGCGGGGGCGGCGGGGGCGGCGGCGTCCGAGCTCTTGAGCGTGATCATCTTCTTCTCGCCGGCGTCTCCCGCGGCCGCCATCGCTCGCTCGCTG
CTGCTGCTGCTGCTGGATCCGGATCGGGGATCGGGGATCGGGAGACGAAACCCTAGAACGGGAGCGGCGGCGGCGACGGACGGAAGGGGAAAAAGCTGGG
AGCTTTGGTGGGTGCGGGGTGGGTTGGTTGGGTCCGCCCGGGTGGG