Detailed information on CNT30399224


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306450Triticum turgidumTriticum aestivum69.4156.95100783reverse complement
CNT30443932Triticum turgidumAegilops tauschii71.2856.7495.65804forward

Expression of CNT30399224

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVVSTARTIMCLREPPIDAPCEVMLTFFFLLFGKVME*

>peptide 2 (36 aa)
MGRCLRGADVEVETWWNPCSQAEAKLAICHCSCESA*

>peptide 3 (86 aa)
FCLLCFSWWFSHCLEDEETNCSFPFECKDGVTSYGSSNCRESMGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRKCLNDPING*

>peptide 4 (71 aa)
MWRLRPGGIHVLRRRLSWRFATAVVNQHKRWHTFGVGAEGLARSRWIIGAAISLATLRGLLRLMASLFRVM*

>peptide 5 (39 aa)
MDYRSRNLARHSAGVVKVDGKPLQSDVVAFFFEKALIHL*

>peptide 6 (37 aa)
FLLTVFFLVVLSLPRRRGNKLQFPVRVQRRSYELWLF*

>peptide 7 (32 aa)
MVELGHSCLLKYVQGNWERILNFENLFPDVKL*

Sequence

>CNT30399224
CTTTCTGCTTACTGTGTTTTTCTTGGTGGTTCTCTCATTGCCTAGAAGACGAGGAAACAAACTGCAGTTTCCCGTTCGAGTGCAAAGACGGAGTTACGAG
CTATGGCTCTTCTAACTGCAGAGAATCTATGGGTCATCATAATCGTGACTTTCTCGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCC
AGACCGCAATGTGAAATAGGAAATTTAGTCAGGAAATGCCTAAATGATCCAATAAATGGTTGAATTGGGCCACTCATGTCTTCTTAAATATGTTCAAGGA
AATTGGGAACGTATTCTTAATTTTGAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCTCTACACTTAAAAGAGTACTAGTGGATTAAGGATACA
AGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGCAAGAACAATTATGTGTCTACGAGAACCTCCAATTGATGCACCATGTGAAGTCATGTTGACATT
TTTTTTTCTTCTCTTTGGTAAGGTTATGGAATAAATTTTGTTTCCCCTAGTATTGTGTGAGTGGTGTATATATTCACTAAACAAGGTTCTTCCATTCCTC
TGTTCCCATATGCCGCTGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAGATTAGCAGGCAGCAGGCTTTGTGGCGTTGATGGGGAGGTGTCTTC
GCGGTGCTGATGTGGAGGTTGAGACCTGGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTGCCACTGCAGTTGTGAATCAGCATAAGAGAT
GGCACACTTTCGGCGTAGGCGCTGAGGGCCTCGCTAGATCCAGATGGATTATAGGAGCCGCAATCTCGCTCGCCACTCTGCGGGGGTTGTTAAGGTTGAT
GGCAAGCCTCTTCAGAGTGATGTAGTGGCTTTTTTTTTTGAAAAAGCTCTTATTCATTTGTAGTAAGTAATACATCGTTTGTGAGGATTAAAGGCTCCTC
AAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGGTGTAGTGGCTAGTCTGGATGAATAGGCAGAGGAAAGGCTGACGGGACGAAATGAC
CCTCCTTGCTTGATCAGGTTATGTATGG