Detailed information on CNT30391539


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673857Triticum turgidumSetaria viridis38.9715.5790.57106forward
CNT30368525Triticum turgidumSorghum bicolor36.416.7890.9199forward
CNT30148503Triticum turgidumBrachypodium distachyon37.8732.9192.23103forward
CNT30116921Triticum turgidumOryza nivara38.9715.8787.74106forward

Expression of CNT30391539

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MIKSLISSYSSRKHIHIAYVGTINQYACMTRPV*

Sequence

>CNT30391539
TTATGATCAAGAGCCTCATCTCATCTTATAGTAGTAGAAAACATATACATATAGCGTACGTTGGTACAATTAATCAATATGCATGCATGACACGTCCGGT
CTGACCCATCAACAATGAACCCAAACTCGCAAGAACAGCGATATGGAGCTAGCTTAATTAGTTGACGGTACTCCTCCTGGGAGATCTTGGAGACGTCCAC
GCCGGAGGGCACGGCGTCCTCGTCGAACACCACGTTGTGCGGGTACCCGGCGTTGTTCTTGAAGGTGATGGT