Detailed information on CNT30388096


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548701Triticum turgidumIpomoea triloba48.863.8597.2107reverse complement
CNT30194417Triticum turgidumSecale cereale24.663.7392.5954reverse complement
CNT30415137Triticum turgidumPapaver somniferum28.774.8695.2463forward
CNT3058868Triticum turgidumAmborella trichopoda27.43.399060forward

Expression of CNT30388096

Peptides detected in this lncRNA

>peptide 1 (34 aa)
EFDPGSEGTLAICLTHASRTLFLGSWAEGKEAPS*

>peptide 2 (35 aa)
MQVERCFWGAGQKEKRLLAKVVSPCFKTTGRALRL*

Sequence

>CNT30388096
TGAGTTCGATCCTGGCTCAGAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGTTGTTTTTGGGGAGCTGGGCAGAAGGAAAAGAGGCTCCT
AGCTAAAGTTGTCTCGCCCTGCTTCAAAACTACAGGGCGCGCGCTACGGCTTTGACCTAACGGCCTCCGTTTGCTGGAATCGGAATAGTTGAGAACAAAG
TGGCGAACGGGTGCGTAAC