Detailed information on CNT30387005


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180109Triticum turgidumSecale cereale4.7730.2188.51174forward
CNT30290161Triticum turgidumTriticum aestivum14.6556.9395.88534reverse complement
CNT30587177Triticum turgidumMusa acuminata1.8921.0486.9669forward
CNT30659808Triticum turgidumTriticum dicoccoides32.4181.8499.831181forward

Expression of CNT30387005

Peptides detected in this lncRNA

>peptide 1 (71 aa)
CFPHQSIRPKSSSNPSPRVASPCPGWCPLACLVPLGLGLERSISMALPCTVASCRLLLHLRSWCMIPPPKS*

>peptide 2 (59 aa)
MHKSSFQMVTYMRVPSPFAVSSWPQHLHRFAAYNPRGCSVTAEFSKVFEPSVRRDDELS*

>peptide 3 (97 aa)
LLPASIDPTKIQLKSLASRRLAVPRLVPAGLPRSSRSRIGEIDFHGPALYSSQLPLAVASAQLVHDPPSQIVVAAGSRPAHHCSTTAPIPSGCELWP*

>peptide 4 (51 aa)
LASRINRSDQNPAQIPRLASPRRAPAGARWPASFLSVSDWRDRFPWPCLVQ*

>peptide 5 (43 aa)
MIFLQVVQLLSQACCLPLPELWNLNLQLSNATSGLPKVLKETW*

>peptide 6 (38 aa)
MTRRLQTCKLKRRKYPVQGHGRITCGLIGPSARRPYSE*

>peptide 7 (40 aa)
MAILVIGDLAEVLTTASVIQWVCHDDEFQKPMLTMCFINK*

>peptide 8 (41 aa)
MILKTHEYEKHIIAISCIFESYKIWFVSLPHTQNKASFQEV*

>peptide 9 (39 aa)
MMSQHDLSEKGIANLCCFRLTPIKLNPMLSAESNAFSGG*

>peptide 10 (40 aa)
MKSLFSGEEQTRRRSVSCLRGILPRLTLMAGCHDKEIADL*

>peptide 11 (34 aa)
MLVLHIPFSVRGSKKVRISTRAVCTRALFKWLPT*

>peptide 12 (29 aa)
MLKGQIGYRIKHIPSGKPLVLFPLGASVQ*

Sequence

>CNT30387005
CTTGCTTCCCGCATCAATCGATCCGACCAAAATCCAGCTCAAATCCCTCGCCTCGCGTCGCCTCGCCGTGCCCCGGCTGGTGCCCGCTGGCCTGCCTCGT
TCCTCTCGGTCTCGGATTGGAGAGATCGATTTCCATGGCCCTGCCTTGTACAGTAGCCAGCTGCCGCTTGCTGTTGCATCTGCGCAGCTGGTGCATGATC
CCCCCTCCCAAATCGTAGTCGCCGCCGGCTCACGACCTGCCCACCATTGCTCAACCACCGCTCCCATCCCATCCGGTTGCGAGCTTTGGCCTTGATTTTG
GTGTCTACCCCGTCTAGGGTTTCAAGCTCAAGCTCAGGGTCGGCGTTTCAGTTTCCGCAAGTGGAGGCGGCAAGCTAGAGACAGCAACTGCATAATTTGC
AAGAAAATTGTTTTCGGGGCCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTATGGAATTTGA
ACTTACAGTTAAGTAATGCCACATCAGGTTTGCCAAAAGTATTAAAAGAGACATGGTGAAAAGCATGATTCCCTATCAGTGTCATGGAAGTACTGAATCA
CATGGTAATATATGCAAGTTTATCTGACCGAGTATAATTCATACAGTAAATGTTGAAGGGACAAATAGGTTATAGAATAAAACATATTCCAAGTGGGAAA
CCTTTGGTTTTGTTTCCTTTGGGTGCTTCAGTCCAATGACTGTCAAGGCGCACCCAAAAAAATTGACTTAGTGATATCAGGTTGAACATATATTTATACA
CCCCACATGATTTGTTGTCTTAGTCATCTTTAATTCTCACAAATGCTTCTGTGAGGCAAATTAACCTGTTAGCATGTGAGCTTCTAAAGAAGTATGAGCT
AGAGGCAGAACTGGTCTGGAAAATGGTGATTATTCTGCTGGAAGAAGATTTCACGTGGCAGTAGAAGGTTGCAGTTGTTTGATACAGAACTGTCATTTGG
GGTTCATCTCACAAGTTTCAGTATTTGGGGTTCATCTCACAAGTTTCAGTATAGACTGAAGGATTTGTATGTGTTGTGGATCTTTTTCAGAAGATGGGCA
CAGGTACATGTTCCCTTAGCTCCCATTATTCCTTCTGAGTTTCTGTTATGTTGGTCTTACACATTCCATTTTCTGTCCGAGGTTCAAAGAAGGTTAGGAT
TTCGACGAGAGCTGTATGCACAAGAGCTCTTTTCAAATGGTTACCTACATGAGAGTTCCTAGCCCGTTTGCTGTTTCTTCTTGGCCCCAACATTTGCATC
GTTTTGCGGCCTATAATCCTCGAGGTTGTTCTGTAACTGCAGAATTTAGCAAAGTATTTGAGCCTTCTGTTAGAAGGGACGACGAGCTATCTTAGTGAGA
AATATACTCGTGTTGGTTGATACCATTCTAGTTGAGCTTTAATGTTTAGTTCTGTAGTTGATCTGATGGGCCATTTGAATGTAAAACAAACGGTGCTGCA
GACAGTAGAACCTTAGGTTCACCTCAAATAAGCTTCAAGAGTCAAGTAAATTGCAGTTCAGTTTGATGCTCACAAACTAGTTTCATCAGTTTGTATGTAG
GCAATAACAGCAGTTCTGCCAATACCTTTCATTGTATAAAGGCGTTTTCAACACTTGGGGTTGGCACAGTATCCATGCCATTCAACAGGGATTTATTAAG
ATTTATAAGAGTTGGTAGAGATCGAAATCTTATCCATTTGGTCAGCAGTTGATCATCGGTGGTGGTGTTCTGTGTCCAATAGCTCACATATTTTCTTGTC
TGAGACCTTGCAACAGTAGTTAGTTTGAGGTGAACAGTCTGGAGCTAGTAGTCAGTTTGAGGTGAACAGTCTGGAGCTGGATCTTGAATGTGAGGGCCTT
TTCCCAGTTTACATGGGCCGAACTACTATCACTTTTTAGTTTGGCTGATGACGAGCCTCCTGAGTCTTTAACTCTATGATGAGCCAGCACGATTTGTCAG
AAAAGGGTATTGCAAATCTATGTTGCTTTAGACTTACGCCTATTAAGTTGAACCCCATGCTGTCTGCCGAGTCTAATGCCTTCAGTGGAGGTTAATTCAC
ATGATTCTAAAAACACATGAATATGAGAAACACATAATTGCAATATCATGTATATTTGAATCCTACAAGATTTGGTTTGTTTCACTGCCGCACACTCAAA
ACAAAGCGTCTTTTCAAGAGGTTTAGTGGATACTAAATTTCCTATGATATGTGTACAAACAAATTCGTGGAAAAAAAATTCTTATAGAATATCCTACTAA
TCAAAGGACCAGACATAGGAAAATTTTGTAAATATACCAATCCTTTGAATTTCCCATGAAAAATCCTTTGAATGAGAGAGGCCCTAAGAGGTTTGAGTCG
GCTGATGATATGTTGATTTGGAGATAGAACTAGATCCCTATAGAATTAATCTTAGTCCGATGTTTTGAAAGTCACTAAATCCTCTATGTAGGGTCTGGGA
GTTGATAGATGGATCTAATGATTGATGGAAGGTGAAGCTACTAGATCAGCAATTTTAATGATAAGAGATAAGGAGGCAATGCTACGTATTTCAGCAAGTT
CTTGAGTACAAGAGGATTTTGGACCACACATCATTAGAAAACTGGATGATTCTTTGTGTGGTCGTATTACTGTATAATCACTGAAACTAAGAACAAGCTG
CTTGAGCCAGTTGCATGTGGTGGAAGAATAAAAAGTTTGCCCGGTGATCTGGAACGTAAAGATCCCACAAAGATTGGTTATTTGCAGCACATACTGACGA
ACTATTCAAGGGATGAACGACGATGGCAATTTTGGTTATTGGTGACTTGGCAGAGGTTTTGACGACAGCGTCGGTGATCCAGTGGGTATGTCATGATGAT
GAATTTCAAAAGCCAATGTTGACCATGTGTTTCATCAACAAATAAGCAATAACTGGATGGCCTCGAATTTTTGGCTATGCTGCGGGGATAGATGAAGTCG
TTATTTTCAGGAGAGGAACAAACTAGGAGAAGAAGTGTATCTTGCCTAAGGGGCATCTTGCCAAGATTGACGCTGATGGCAGGCTGTCATGACAAGGAGA
TTGCAGACTTGTAAATTGAAACGGAGGAAGTACCCGGTGCAGGGACATGGAAGGATAACTTGTGGGCTCATTGGTCCAAGTGCTCGAAGGCCCTACTCAG
AATAAACGGAATGTCATGTATGAGGCTGCCTCCTTAACCCTTGATCTTCGGCTCTGAGATGTCCTTGGACTAACTTGAAGCTCTCAAAGATTCTTACTGA
GTTTCTTAGAAGAAAGATCACTTTCAGGAGGCCTGTTTCAGCTTTCGGAGAGGGACTAAAACACTAAAGCACATGTTCTAGTGGAAGTTGCACATGTTCT
AAGGAAACATCCTCTTTTTACCCTTGATATCATACCTTTGGAATAAAAGTCTCTTGTTTGTAAAGAGAGTGTTTGCTGTACTGACACGTATATATATCAA
TTGGTTTCACTAAAAAAGGATGTTGACTAGTGGAGACATCAAGGAGGTTGATTTAGACCGAAGGAACTATTGAAATCTGAACTCAAAGAGATGAAAATAA
ACACGGGCTAAGGGTCCGACATCTCCGATGCTCTTCCTTTCTCG