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Detailed information on CNT30386302


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 4e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287828Triticum turgidumTriticum aestivum95.8571.9899.46740forward
CNT30248284Triticum turgidumAvena sativa49.615191.38383forward

Expression of CNT30386302

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

>peptide 2 (44 aa)
MLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30386302
GTCCGCTTGTTGTATATAATAAATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAA
CACAGATCATACCGAACGAAAAATATGCTCTGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCA
ACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACG
CGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGA
AGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTG
TGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCATAGTATCCGGGGGAGCTATTGTGCTCACGGAAGACGAAACCA
ACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTAAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGG
TCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATTAACACAATTGATCAACACTTAG