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Detailed information on CNT30381428


BLAST search results

BLAST vs Swiss-Prot:
sp|P93111|HEM11_CUCSA, E-value = 2e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567387Manihot esculentaActinidia chinensis49.6240.9684.69392forward
CNT30172717Manihot esculentaTrifolium pratense47.5926.6184.57376forward
CNT30118924Manihot esculentaCitrus clementina28.8641.1689.04228forward
CNT30723409Manihot esculentaLupinus angustifolius12.4122.6986.7398forward

Expression of CNT30381428

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MFEEPTNVPSKANNSLANFNNLFNLSKNLTFSQNK*

Sequence

>CNT30381428
CCCACATCAGTACATGAACTAATCTCACCTTATCATTCCTCGCGTAACTTAGAACGATGAATTGTTACTAAGGAAGACACGGGACGTACAGGATTGAACA
CGAATGCAAGTCAGGAAGAGCGTCTTACACAAGATAATTGAATTCAAAGATCTCCTTCAGGGACCTGAACAACGACTATAGTGAAGGTTACAATGGTGTG
AATACAGTTTCCCTCTTATTCAATTTGGAGTGATACATGTGGTGATTTTTTGTAGTGGAGCTTACTTCTGGTTGGTTTTGGCTCGAAGCTTTTGTTCCAA
CACGGCTACTTCTGTCTCGAGGCTGAACATTCTGTTAAGAGCATGCATGTTCTCGAGGGTCTCACTTAGAGTTCGGCTGTCACTGCCATCGCATCTCAGG
GGTTTGTAAATAATCTCAACATCCTTCAGATCTTGACGTATAGCTGCAACTCTCTCCTCACTTCTGTTTACAACAACCATCTTTGTGCAACCCTTTGCTA
CCAAGTGTTTGATCACAAGCTTCCCCATCTTACCGGCTCCAATCACCAACATCCTGGCAGTAGCATGTGAAGATTCAGGAAGCTTCATCAAAGCCAATTC
AACAGCTGCAGAGCTTACAGAAACAGCACCAGCAGCAATATTCGTCTCTGTCCTAACACGCTTTCCAACAGATATTGCATGTTTGAAGAGCCCACTAATG
TTCCTTCCAAAGCCAACAACTCCTTGGCCAACTTTAACAACTTGTTTAACCTGAGCAAGAATTTGACCTTCTCCCAGAACAAGTGAGTCA