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Detailed information on CNT30381246


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372815Manihot esculentaArabidopsis thaliana19.0955.3684.52155forward
CNT30196808Manihot esculentaPisum sativum7.6426.1687.162forward
CNT30231796Manihot esculentaAnanas comosus13.1828.3883.18107forward
CNT30353979Manihot esculentaEragrostis tef8.7426.187.3271forward
CNT30622201Manihot esculentaCajanus cajan12.0744.1487.7698forward

Expression of CNT30381246

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PNFWSRTLTKGARQLVVQEALLMIGSSGL*

>peptide 2 (35 aa)
KLLVEDLDKGSKTVGSARSIADDRLIRIVESYLRR*

>peptide 3 (42 aa)
MRGLLDTASVVDGNDIQRRILAPMPAPQEVPANPTKAIYGHF*

>peptide 4 (48 aa)
MAMTSRGESLRPCQHLKKFLPIRPKPFMATFNLASAAVFLYPPLLLPT*

Sequence

>CNT30381246
CCAAACTTCTGGTCGAGGACCTTGACAAAGGGAGCAAGACAGTTGGTAGTGCAAGAAGCATTGCTGATGATAGGCTCATCAGGATTGTAGAGTCGTACTT
GAGGAGATGAGAGGCCTGCTTGATACCGCCAGTGTCGTTGATGGCAATGACATCCAGAGGAGAATCCTTGCGCCCATGCCAGCACCTCAAGAAGTTCCTG
CCAATCCGACCAAAGCCATTTATGGCCACTTTTAACTTGGCCTCAGCTGCAGTTTTCCTGTATCCTCCATTGCTACTCCCGACCTGATTGATAGTCAAAT
ATATGAAAATTAAGATGTCACCAATCAAAATTATCTGACAGATATCAGCTCCTACTTGTCATCAGCTGAAAATATTTAACTTCTCGTTCTAAACAACATT
CTTAAAGCAACAAGAACTGAAATATTGCCTAGAGCGCTTAGTCAGTTCTGTTAAAAGGCATCTAACTCAATATCGAGGTCTCGAGTTTGATCACGTCCCC
GTTTAGAAAAAAAAGGAACTAAAATATTGGCTTAGTAGCCCAGCCCCTTATGTTCTGTCTTGTAGTATCAAGAGGTCATGTGTTCAATCTTAGATATCCT
GTAATACCTCAAATCATTTTCTAGCTAATGAAGCAAATTCAGAACTGAAAAAGCTAAAAACGTTGGAAGAAATTCCCATTTGACAAATTCTGTATTCAAT
GTACTAATTCTGTATTCAATTGGCATAAATATAAACTCAAATACATGGTTTCTCACTTGATAAATAGTGGCATGCATGCATTAAAATGCCTAGTTTATTA
GTTAATATAGAG