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Detailed information on CNT30377598


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT003282, E-value = 1e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538573Arabidopsis thalianaBrassica napus28.5417.5882.35119reverse complement

Expression of CNT30377598

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMIILHLYDNHRSKSLFTFSFCLLSKEYLFHTTK*

Sequence

>CNT30377598
ACGCGCAGAGAGAGAGAGAGAGCCACGTCCCTGTTGCAAAATAAGCCGTAGGCTTCTTCACTGTGAAGCAAACACAAGTTTTTGACAGAAGTGAAGAACA
CATACACTCAAGATCTCGATGCAATTCTCACACGAATAAGGTGGCTAATTAAGTAGTGGGAGAGTCACCGGAAGATTGTCGGAGATTTGTCCAGCAGGTG
ACATCTCCATCTCAGCTTCTGCTCCCACATGATGATTATTCTCCATCTGTACGATAATCATAGGTCAAAATCACTATTCACTTTCTCTTTTTGTCTTCTA
TCCAAGGAATATCTTTTTCACACCACCAAATAACAACCATTAAAAAACACTACAGAAGGTTATGTTTCTCATAATTTGTGTGTTCTTTATGTTTAAGCTT
TTAAGTTTGGAAGCAGT