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Detailed information on CNT30377540


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94JS0|UCRI1_ARATH, E-value = 1e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628555Arabidopsis thalianaVigna unguiculata6.3220.9286.373forward

Expression of CNT30377540

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MSAYSNHDQPFWILDSNRVFLWVPQGSNIHTIGQLDVIFCSSPDEDGLSTPLDCHGSSWFYAP*

>peptide 2 (59 aa)
MSSSVLRLMKTGFPRHLTVTVVPGSMLPRSTSRDARARTSLLADMLTISFRTSRRRTEA*

>peptide 3 (34 aa)
MDKRRLSILQTKITSLYYSAKTSQSCSNMPENIN*

>peptide 4 (40 aa)
MSSSVLRLMKTGFPRHLTVTVVPGSMLTISFKTSRRRTEA*

Sequence

>CNT30377540
ATGGATAAACGAAGATTGAGTATACTTCAAACAAAAATCACAAGTTTGTATTATTCAGCAAAAACAAGTCAATCTTGCTCTAACATGCCGGAAAATATTA
ATTAAAAGAAAAAAAGAACAAGTGAAGATCATCATTCAGATCCAGACTCTTGACTGTTGTGCTTTTATTAATCAACCGATGAGTAACTTATTCTCTTCCA
GGAAGCTGTAGGTTGGTACTTCCAGGTTGTATGGTGCAGGACCTTTCCTAATTCTTCCAGATATATCGTAATGTGATCCGTGACACGGACAAAACCAACC
ACCATAATCACCAGCATTAGGCAAGGGGATGCACCCCAAATGAGTGCACACTCCAACAACCACTAACCATTCTGGATTCTTGACCCTAACCGAGTCTTCT
TGTGGGTCCCTCAGGGATCCAACATCCACACTATTGGCCAGCTTGATGTCATCTTCTGTTCTTCGCCTGATGAAGACGGGCTTTCCACGCCACTTGACTG
TCACGGTAGTTCCTGGTTCTATGCTCACAATAAGCTTCAAAACAAGCAGGCGGAGGACAGAGGCATAAACAAACCTCCCACCCGACAAGACAAAATAGGC
GAATGCACGCTTGCTAGGGTCACCAGGTGGGTAACGCTCATGGTTATGGTCATCATAGACAATCTTTGAGTTAGGCAAGGGGATGCACCCCAAATGAGTG
CATACTCCAACCACGATCAACCATTCTGGATTCTTGACTCTAACCGAGTCTTCTTGTGGGTCCCTCAGGGATCCAACATCCACACTATTGGCCAGCTTGA
TGTCATCTTCTGTTCTTCGCCTGATGAAGACGGGCTTTCCACGCCACTTGACTGTCACGGTAGTTCCTGGTTCTATGCTCCCTAGGTCAACCTCGAGGGA
TGCAAGGGCAAGGACATCTTTACTTGCAGACATGCTCACAATAAGCTTCAGAACAAGCAGGCGGAGAACAGAGGCATAAACAAACCTTCCACCCGACAAG
ACAAAATAGGCGAATGCCCGCTTGCTAGGGTCACCAGGTGGGTAACGCTCATGGTTATGGTCGTCATAGACAATCTTTGAGTTAGGTGTTTTGACAGCTT
CGACTGTGGCTGGGACTTCCGAACCAAAACCTATCTCATTTCCCTGAGTAATGAC