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Detailed information on CNT30376379


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 2e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Arabidopsis thalianaSetaria italica44.2258.2381.46329forward
CNT30640872Arabidopsis thalianaNymphaea colorata87.986.3979.2654forward
CNT30536042Arabidopsis thalianaEucalyptus grandis64.3887.0982.67479forward
CNT30316118Arabidopsis thalianaCorylus avellana73.2576.3381.1545forward
CNT30500730Arabidopsis thalianaCoffea canephora67.257.8781.6500forward
CNT30524942Arabidopsis thalianaPhaseolus vulgaris69.6277.278.57518forward
CNT30628702Arabidopsis thalianaVigna unguiculata62.7768.1879.66467forward
CNT3042412Arabidopsis thalianaPrunus dulcis78.4978.8181.51584forward
CNT30304911Arabidopsis thalianaTriticum aestivum33.7441.9782.47251forward
CNT30559890Arabidopsis thalianaActinidia chinensis69.8976.1381.92520forward
CNT30591924Arabidopsis thalianaMusa acuminata36.9651.5980.36275forward
CNT30235097Arabidopsis thalianaBrassica oleracea99.0692.0187.92737forward
CNT30311670Arabidopsis thalianaCamelina sativa69.2293.4787.77515forward
CNT30263459Arabidopsis thalianaBrassica rapa72.7210087.8541forward
CNT30607989Arabidopsis thalianaGossypium raimondii70.8375.580.08527forward
CNT30205103Arabidopsis thalianaHelianthus annuus29.0330.5183.33216forward
CNT30688581Arabidopsis thalianaTriticum urartu33.7443.282.47251forward
CNT30154712Arabidopsis thalianaPrunus persica98.2593.8481.12731forward
CNT30408809Arabidopsis thalianaPapaver somniferum63.9855.0980.46476forward
CNT30642027Arabidopsis thalianaCannabis sativa54.363.3281.44404forward
CNT3028162Arabidopsis thalianaTheobroma cacao68.8291.2782.23512forward
CNT3049385Arabidopsis thalianaCucumis sativus63.9860.183.4476forward

Expression of CNT30376379

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLGCKMVKLGCKKERLGCMLVKLGCKQVKSGCKQAKSGCNLGK*

>peptide 2 (49 aa)
MMDYILEKKKAKRPFHQHMEKTVHLTLGINAYLDLTGSLETSCLHGKECL

Sequence

>CNT30376379
GTAGTTGGGAGATGTAGGACTGTAGGGGCTAGCTGGTGATAGTCTTGCATTGCTAGGAGAGTAAGCTATAGATGGGCTATATTTAGCAGACTGAGGGTTG
TAGCTTGGAGACGTAGGACCGTAGCTTGGTGATGTTGGACTGTAACTTGGTGAAGTAGGGCTGTAGCCAGGAGATGTGGGGCTATATGCGGGTGAAGTAG
GGCTGTAAGACGGAGATGTTGGGCTGTAAGATGGTGAAGTTGGGCTGTAAGAAGGAGAGGTTGGGCTGTATGCTGGTGAAGTTGGGCTGTAAGCAGGTGA
AGTCGGGCTGTAAGCAGGCGAAGTCGGGCTGTAACTTGGGGAAGTAGGACTGTAGCTCGGAGATGTCGGGCTGTAGCTTGGCGACGTTGGGCTATAGCTT
GGAGACGTTGGGCTGTAGCTCGGAGAGGTAGGAGAATAGGAAGGACTTGTAGGAGAATAAGCAGGGCTTGTTGGGCTATAGCCAGGAGAACTGGGACTGT
AGGTAGGCGAAGTTGGACTGTAACCGGGAGAAGTCGGGCTATATCCAGGCGAAGTTGGACTGTAACCGGGAGAAGTAGGACTGTATCCAGGCGATGATGG
ACTATATCCTGGAGAAGAAGAAGGCGAAAAGGCCATTCCACCAACATATGGAGAAAACTGTGCATCTGACATTGGGGATAAACGCATATTTGGACTTAAC
AGGTAGTTTGGAGACATCATGCCTTCATGGTAAGGAGTGCCTGA