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Detailed information on CNT30374577


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT001258, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094424Arabidopsis thalianaSolanum tuberosum12.7521.4394.7457reverse complement

Expression of CNT30374577

Peptides detected in this lncRNA

>peptide 1 (31 aa)
VSTSPLGMSDLAIQEEDIFPSINSIVRIPKG*

>peptide 2 (30 aa)
MCFCPSFPSSMLLENSARILPPSGKSFKRE*

Sequence

>CNT30374577
GTGTCAACGTCTCCACTGGGCATGTCCGATCTGGCGATCCAAGAGGAAGATATCTTTCCATCAATAAACTCTATTGTGAGAATTCCTAAGGGGTAGACAT
AATTTCAGAGCGAGAGAAGTGTTGAGCGATAAACTTTAAAGATGTTTTCCGTGAGTGCTGTCATATTCGTCAAAGATGGTGGAAGCATAAGGTGGGGGAG
AAAGTTCGAGAAAGTTTGAGAAAGTTGAAGGAACATGTGTTTTTGTCCGAGCTTCCCAAGCTCTATGCTGTTGGAGAACTCTGCAAGGATCTTGCCACCT
TCAGGGAAAAGCTTCAAAAGAGAGTAACAAAGAGGAAAATCTGAAACAAAGAAGAATCAAGAAGATGATATCCTGATGCCCGGCAAGCAAAAGCTTCTCC
AATGTTGGAAACCTTGATCGGGAAAGACGCCTCGTTGTTCATTCCCG