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Detailed information on CNT30373030


BLAST search results

BLAST vs Swiss-Prot:
sp|P30224|DEF13_ARATH, E-value = 5e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3079407Arabidopsis thalianaBrassica juncea3763.8785.71175forward
CNT30260296Arabidopsis thalianaBrassica rapa35.3166.895.21167forward
CNT30115312Arabidopsis thalianaEutrema salsugineum38.4847.486.26182forward

Expression of CNT30373030

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MSCFLKVNALILARVTVSANSGPCPTWPLAQLLCFHHHRSEEKSNDGSRLSHDYCLYLVVFDVYMF*

Sequence

>CNT30373030
ATTTTTTTTTATTTTTTTTAGTATACGTCGTACGTAAAAGTTTATCTTATTAAAACAAAGCAACATAACATATCTGGTACATGTCATAAGACCTCTCATA
GAGTGACACATACTTATTTAATAGAAATACACACTTTATAATTAAGCATTAAGAGCTCTTGGTAGATTAACATGGGAAGTAGCAGATACATTTGTGAGCT
GGGAAGACATAGTTGCAAGATCCATGTCGTGCTTTCTCAAGGTTAATGCACTGATTCTTGCACGCGTTACTGTTTCCGCAAACTCCGGACCATGTCCCAC
TTGGCCTCTCGCACAACTTCTGTGCTTCCACCACCATCGCAGCGAAGAAAAGAGTAACGATGGTAGCAGACTTAGCCATGACTATTGTTTATACTTAGTT
GTTTTCGATGTATATATGTTTTAGTTTGAAGAAATCTGCTTGAAATCAACCACTATTTATAGTGAAAAAATGA