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Detailed information on CNT30371585


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LPW0|G3PA2_ARATH, E-value = 5e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196808Arabidopsis thalianaPisum sativum17.3928.6991.1868forward
CNT30490066Arabidopsis thalianaOlea europaea64.7128.3679.84253forward
CNT30509382Arabidopsis thalianaSolanum lycopersicum34.2720.9788.81134forward
CNT30146657Arabidopsis thalianaMedicago truncatula35.0412.4984.67137forward
CNT30648504Arabidopsis thalianaRosa chinensis28.915.5284.96113forward
CNT30357505Arabidopsis thalianaLactuca sativa30.1817.8888.14118forward

Expression of CNT30371585

Peptides detected in this lncRNA

>peptide 1 (52 aa)
DEWSETVSSTRRIADDRIFMAVKFSIDTNDISWDVTFSRCSDKNLLGSSLKV*

>peptide 2 (32 aa)
MPTPQEVPTNPTEPIDGYLYLGLGKSRGVSKS*

>peptide 3 (50 aa)
MTTTSRGESLRPCQHLKKFLPILPNPLMATFILASGRAEEFRSPENSEKP*

Sequence

>CNT30371585
TGACGAATGGAGCGAGACAGTTAGTAGTACAAGACGCATTGCTGATGATCGTATCTTCATGGCTGTAAAGTTCAGCATTGACACCAACGACATAAGTTGG
GATGTCACCTTTTCCAGGTGCAGTGATAAGAACCTTCTTGGCTCCAGCCTGAAGGTTTGACATCAGCGTCAAAGATTCCAAGAGTTGAGTCGTATTTGAG
GAGATGTGATGCTTGTTTAACACCACCAGTGTCGTTAATGACAACGACATCAAGAGGAGAGTCCTTACGACCATGCCAACACCTCAAGAAGTTCCTACCA
ATCCTACCGAACCCATTGATGGCTACCTTTATCTTGGCCTCGGGAAGAGCAGAGGAGTTTCGAAGTCCTGAGAACTCAGAAAAACCCTGAA