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Detailed information on CNT30371431


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578404Oryza glumipatulaOryza barthii55.0497.7199.53213forward

Expression of CNT30371431

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MITLTLNTTIERHINTTTNLKHEITLTDSNATRIWTFLRLSLFNYHSL*

>peptide 2 (46 aa)
MKQNDNFNTEYDHRKAHKHNHKLKARNYSHGLKRHENLDISAALII*

>peptide 3 (31 aa)
MSFSFSGDSELPSSSSYSTLSLATQEPSPVAS

Sequence

>CNT30371431
CTTCCATATTAACCTCCAAACCATAGCAGAACACATTCAGACTTGCCTCTCTTTATTCACCCATTGATGAAGCAAAATGATAACTTTAACACTGAATACG
ACCATAGAAAGGCACATAAACACAACCACAAACTTAAAGCACGAAATTACTCTCACGGACTCAAACGCCACGAGAATTTGGACATTTCTGCGGCTCTCAT
TATTTAATTATCACTCACTCTAGGTGGGATATACTGGATAGAGGCAGTAGTCCTCGATCATCTTGAGCATGCCATAGTAGCCATCCACGATGTCCTTCTC
CTTCTCCGGCGACAGTGAGCTGCCGTCCTCGAGCTCGTACTCCACCTTGAGCTTGGCCACACAGGAGCCATCGCCGGTGGCCTCAAG