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Detailed information on CNT30371376


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677251Oryza glumipatulaSetaria viridis37.5829.1993.44183forward
CNT30523711Oryza glumipatulaSetaria italica24.8529.9581.82121forward
CNT30529038Oryza glumipatulaEucalyptus grandis25.6734.0682.4125forward
CNT30295690Oryza glumipatulaTriticum aestivum37.1730.8388.4181forward
CNT30223563Oryza glumipatulaHordeum vulgare28.5428.3186.33139forward
CNT30392240Oryza glumipatulaTriticum turgidum36.3422.1887.57177forward
CNT30664196Oryza glumipatulaTriticum dicoccoides36.3424.3888.14177forward
CNT30462022Oryza glumipatulaSaccharum spontaneum37.1733.7792.27181forward
CNT30232303Oryza glumipatulaAnanas comosus23.6119.5683.48115reverse complement
CNT30683568Oryza glumipatulaTriticum urartu28.7528.5186.43140forward
CNT30338280Oryza glumipatulaEragrostis tef33.8830.7892.12165forward
CNT30367417Oryza glumipatulaSorghum bicolor38.8167.7490.48189forward
CNT30105156Oryza glumipatulaOryza longistaminata58.9353.3595.12287forward

Expression of CNT30371376

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MTRREPCTPLIWTHRGQGCRENQATQAELTAPPVSLSLVDQPKRWCFFSPVDSSALLWSFFFSWCSWKA*

Sequence

>CNT30371376
CAAGAGATGGTTATCTTTCTGATAGATTCCTATAGCACTTCTGTAGTTCTCGATATAATTTAACACACTAAAATCTACTCAACTTTAATGGTTTTTCAAA
TAGAATGGAGAAAGTCAAGGTTCGATAGATATTGCTTCACTTGTACAAAGTACAGATAAAAATACATTGATACATGACACGGAGAGAGCCATGCACACCA
CTTATTTGGACACACAGAGGGCAAGGCTGCAGAGAAAATCAAGCAACACAAGCTGAACTCACGGCCCCACCTGTCAGCCTCTCACTGGTCGATCAGCCGA
AGAGGTGGTGCTTCTTCTCGCCGGTGGACTCCTCGGCGCTCTTGTGGTCCTTCTTCTTCTCGTGGTGCTCGTGGAAGGCGTAGCCGCCGGCGCCGACCGC
CGCCGTGGCCGCGATCTCCTCCGTGATCTTGTGCCTGTGCGCGTTCTCCGGGTCCTTCTTCGCCTCGTGCTTCTCATACTACACACC