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Detailed information on CNT30371257


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104124Oryza glumipatulaOryza rufipogon59.3765.9197.35377forward
CNT30578337Oryza glumipatulaOryza barthii38.5822.1392.65245forward

Expression of CNT30371257

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLYCMLEIVSLKYSRPYITVTVNLIKSMWHCVTNSIQSIWFSEI*

>peptide 2 (32 aa)
MPKRRRNNRSGCVGRGFHRHQISGKSRQKISI*

>peptide 3 (67 aa)
MSVVHLRLPAASGGKLLLLAVLLLAVMHCGCAMAVQGGGGGGWRRMLRGPVSTLGSPMPNWQPNHNG*

>peptide 4 (54 aa)
EGTCNQIKLHAEAKGRVNLARTVVDSISPCPSFIFVFLQQAAASCCCSPCCFSR*

Sequence

>CNT30371257
GAAGGAACCTGCAATCAAATTAAGCTCCATGCAGAAGCTAAGGGCAGAGTAAATCTCGCTAGAACTGTAGTTGACAGTATATCACCATGTCCGTCGTTCA
TCTTCGTCTTCCTGCAGCAAGCGGCGGCAAGCTGCTGCTGCTCGCCGTGCTGCTTCTCGCGGTGATGCATTGCGGCTGCGCCATGGCCGTGCAAGGAGGA
GGAGGAGGAGGATGGAGGAGGATGCTGCGCGGGCCGGTGTCCACGCTAGGGTCGCCGATGCCAAACTGGCAGCCGAATCATAACGGCTAATTAAATCAGG
TGCTTTCTTTACATTTTACGTGTAATTTACTGCCAATGCCCAAGAGGCGCCGAAATAATAGATCTGGTTGTGTGGGAAGAGGATTTCACCGCCACCAAAT
CAGTGGGAAGTCACGTCAGAAGATCTCAATCTAGTTGTCTATGCTGTATTGTATGCTCGAAATCGTGTCATTGAAATATTCAAGACCTTACATAACTGTT
ACGGTAAATTTAATAAAATCCATGTGGCATTGTGTAACCAACTCTATACAGAGCATATGGTTCTCTGAAATATAATGTGTATATGCCTCTTTTTATTCAT
CCATGTTCCTGCTAAAATCCTCTTCGTCATGGATC