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Detailed information on CNT30371170


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007533, E-value = 1e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692900Oryza glumipatulaOryza sativa31.9433.5993.97398forward
CNT30110050Oryza glumipatulaOryza longistaminata25.6899.6993.75320forward
CNT30101766Oryza glumipatulaOryza rufipogon31.7831.5390.91396forward
CNT30117152Oryza glumipatulaOryza nivara12.8435.4887.5160forward

Expression of CNT30371170

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLRKVQKRLKKLKRRSTSLKVMIRRVRLCLGQVACGVESP*

>peptide 2 (37 aa)
YFSSLSLQYRLQPLAADLRPNWLGFSPPNPAFPLVHF*

>peptide 3 (41 aa)
LLFLAVATVSSSTSGSRPETELARFFPSKSGLSSRAFLKLV*

>peptide 4 (31 aa)
MERGGPCDGLCRFRIHLGTRGDCPLPCEEWG*

>peptide 5 (28 aa)
MSAHGNMSWGCVLWVQLYTSDQSKTIQIA

Sequence

>CNT30371170
CTACTTTTCCTCGCTGTCGCTACAGTATCGTCTTCAACCTCTGGCAGCCGACCTGAGACCGAATTGGCTCGGTTTTTCCCCTCCAAATCCGGCCTTTCCT
CTCGTGCATTTCTAAAATTAGTTTGAGGGGAAATTATCTCCTCCTTATCCTCTTTCTTTCCGCTAAAATTTCGGAGATCAATTTTGCCCGGATAAACCGA
ATCGAATTCGTTTTCGAGTTTATCTCTCCACCTAACCCTCGGATTTTCCAGCTCAAATCCTTTCGTTTGGAGTCCGATCTCCCTCACCCATGCCTATATA
AAGCATCCCCTAGTTGTCCTCTTCCGTTTGCCTCAAGTCCAAGCCGCAGCCGTCGCCCGTAGCGCCGCCGCCACGCTAGCCCTAGCGCCGCCGCCGCCGA
CGCCGCTTCAGCCGCGCCGCGCCGCTGCTGTGGCCATCGCCGTCGCCTTCCGTCGCCACCGCCGGGTTCGTGCGGAGGAGGAGCACCCCGTCCGCCCCTT
CGCAGCCGCCGAAGACCGCCGGAGCGCCGCCGTCGACGTTGAGCCGAACCGTGCCGCCTTGGGACCTCGTCGCCGGCCGTCGTTTGTCGTCGTTCGTCAT
TGTTCTTTGCACCGTTTCCGACATTCCGGAGGAGAGCGTTTATGTTGAGGAAGGTTCAGAAGCGTTTGAAGAAGCTCAAGAGGAGGAGTACTTCATTGAA
GGTGATGATCAGGAGGGTTAGGCTTTGTTTGGGTCAAGTTGCTTGTGGAGTGGAGTCGCCATAGCTGTTCCGTCTTTTGTTTTTATTTCCGCTGCGTAGA
ATTTTATTCTTTTGAGAGGAACTATCCACCTCTGTAATAATTTATTATTTTGCGAATATTAATTAGTAGTTTGATAGTACTCTATTATCAATTTGTTATT
GTGTGCCTCGGCTGATTCCTGGACGAGGATTTAATGCGCTTGTAAGCGTTTGGAATTTTGGATAGAAATTCCGGGCGTGACAATGGAGCGGGGCGGGCCC
TGCGACGGCCTCTGTCGCTTCCGGATTCATCTAGGCACGAGAGGGGACTGCCCGCTGCCTTGCGAGGAGTGGGGGTGAAACCTGAGGTGTGGTGTGCTTG
GCTAGAGGGGGTTATGCGAAGGGTCCTGTCACGGCCTCTTTCCGGTATGTCGTGGTGGCATGTCGGCGCACGGTAACATGTCGTGGGGCTGTGTCTTGTG
GGTACAGTTGTACACCTCTGATCAGAGTAAAACTATTCAAATAGCC