Detailed information on CNT30370942


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577544Oryza glumipatulaOryza barthii77.94100100311forward

Expression of CNT30370942

Peptides detected in this lncRNA

>peptide 1 (36 aa)
DWGSSPRGGRRRCGFTARVDPPPILQLLPMSLHISQ*

>peptide 2 (38 aa)
GLGLVASRRPTAMWLYGEGRPTAYSSTASDVPPYISVS*

>peptide 3 (73 aa)
IGARRLEEADGDVALRRGSTHRLFFNCFRCPSIYLSELIRRGRCRLAGSLHPANLHFFSSIQCFLHDQYLKSQ*

>peptide 4 (29 aa)
MCGSLQFADQWLYMVDINLKITGSIWLIT*

Sequence

>CNT30370942
GGATTGGGGCTCGTCGCCTCGAGGAGGCCGACGGCGATGTGGCTTTACGGCGAGGGTCGACCCACCGCCTATTCTTCAACTGCTTCCGATGTCCCTCCAT
ATATCTCAGTGAGTTGATTCGCCGAGGAAGATGCCGACTCGCCGGATCCCTTCATCCTGCCAATCTTCATTTTTTTTCCAGTATACAGTGCTTCCTACAT
GATCAATATCTCAAATCTCAATGAAGATAGGTAGATTGTTATTCCAGGTTGGTTCTCTGGATGTGTGGAAGTTTGCAATTTGCAGATCAATGGCTGTATA
TGGTTGATATAAATTTGAAGATCACTGGCTCTATATGGTTGATAACTTGATATGAGGGTAATTGGGAAATCTGTGATAATCACATCTCAAGAAGCTATG